Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_016800
Help
Entry
PCC21_016800 CDS
T02320
Name
(GenBank) hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcc03009
]
PCC21_016800
Enzymes [BR:
pcc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PCC21_016800
Ribosome biogenesis [BR:
pcc03009
]
Prokaryotic type
ribosomal protein modification factors
PCC21_016800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AFR03083
LinkDB
All DBs
Position
complement(1896157..1897470)
Genome browser
AA seq
437 aa
AA seq
DB search
MQQPRIGFVSLGCPKNLVDSERILTELRTEGYQVVPRYDDAELVIVNTCGFIDSAVQESL
EAIGEALNENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEQVLSHVHQYVPKPTHNP
FTSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGSVLDEAKRLVDA
GVKELLVISQDTSAYGADVKQRTGFWNGQPVKTSMVSLCEQLASLGVWVRLHYVYPYPHV
DDVIPLMAEGKILPYLDIPLQHASPKILKLMKRPGAVERTLERIKRWREICPDLTLRSTF
IVGFPGETEEDFQMLLDFLTEAKLDRVGCFKFSPVEGASANALPDQVPEEIKEERFHRFM
QLQQAISTQRLQDKIGREVLVLIDEIDEEGAIGRSMADAPEIDGAVYLNGETGVKVGDIV
KVKVEHADEYDLWGSRV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaccacgtatcggctttgtttccctcggttgcccgaaaaacctcgtcgactcc
gagaggattctgaccgaactgcgtactgaaggttatcaggtcgtcccacgttatgacgac
gctgagctggtgatcgtcaatacctgtggttttattgacagcgccgtacaagagtcgctg
gaagccatcggcgaagcgctgaatgagaatggtaaagtcatcgtaacgggctgtttgggt
gccaaagaaaatcaaatacgcgaagtgcatcccaaagttctggaaattaccggtccgcac
agctacgagcaggtgctgtcgcacgtacatcaatacgtccctaaaccgacgcataacccg
tttaccagtttagttcccgagcagggagtgaaactcacgccgcgccattacgcctatctg
aaaatttcagaaggctgtaaccaccgctgtacgttctgcatcatcccttctatgcgtggc
gatttggacagccgtccaattggctcggtgctggatgaagcgaaacgtctggttgatgcc
ggagtaaaagagctgctggtgatttctcaggatacctcagcgtacggcgcagatgtgaag
cagcgtaccggcttttggaacgggcaaccggtcaaaaccagcatggtcagcctgtgtgag
caactggcatcgctcggcgtgtgggtgcgcctgcactatgtctacccgtatccgcacgta
gacgatgtgatcccgttaatggcagaaggcaaaatcctgccttatctggacattccgctc
cagcacgccagcccgaaaattctcaagctgatgaaacgtccgggtgcagtagaaagaacg
ctggagcgcattaagcgctggcgcgaaatctgtccggacttaacgctgcgttctaccttt
attgtcggcttccccggcgaaacggaagaagatttccagatgctgctcgacttcctgaca
gaagccaagcttgaccgcgtgggctgctttaaattcagcccggtcgaaggcgcgtcggca
aatgccttgccggatcaggtaccggaagagatcaaagaagagcgtttccaccgcttcatg
cagcttcagcaggcgatttctacccagcgtttgcaggataaaattggccgtgaagtgctg
gtgctgatcgatgaaatcgacgaagaaggcgcgattggccgtagcatggccgatgcccct
gagattgacggcgcggtttatctgaacggcgaaaccggcgtgaaagtcggtgacatcgtt
aaagtgaaagtcgaacacgcagacgagtacgatctgtggggtagccgagtttaa
DBGET
integrated database retrieval system
