Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_017380
Help
Entry
PCC21_017380 CDS
T02320
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcc03009
]
PCC21_017380
Ribosome biogenesis [BR:
pcc03009
]
Prokaryotic type
ribosomal protein modification factors
PCC21_017380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AFR03141
LinkDB
All DBs
Position
complement(1962121..1963884)
Genome browser
AA seq
587 aa
AA seq
DB search
MTQTFIPGKDAALEDSIARFQQQLQDLGFNIEEASWLNPVPNVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFYLGKSIANGDFVHYPNEKWFPIPEDDALPEG
ILDARLHQFYDPEQELSASDLIDLQSGNADRGICALPFTRQSDQQTVYIPMNIIGNLYVS
NGMSAGNTANEARVQGLSEVFERSIKNRIIAESISLPEIPQAVLNRYPGVVEAIATLEKE
GFPIFSYDASLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHANLETHFIDSSGLISWDMFKKEADYEFADWSFKGSTEEEFATLM
AIFKQEDKEVYIADYEHLSVYACRIIVPGMSDIYPADDLLLANNSMGAHLRDTLLALPDS
KWEQEDYLALLQQLDDEGLDDFTRVRELLGIATGKDNGWFTLRVGELKAMLALAGGDLDQ
ALSWTEWTQDFNDSVFTAQRSNYYRCLQTLLLLAQEPERDPAEYYDAFTKMYGSETVDAA
SAAVAGEACFYGLFAVDDTFTSLPAHQSLLAAYEKLQQAKRRYWQAK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaacgtttatcccaggcaaagacgccgccctggaagattccatcgcccgtttt
caacaacagctccaggacctggggtttaacatcgaagaagcgtcatggctgaacccggtg
ccaaacgtctggtctgtccatattcgagaccgcgattgcccgctctgcttcactaacggt
aaaggtgccagtaagaaagcggcgctggcctctgcgttaggcgagtatttcgaacgtctg
tccaccaactatttctttgctgacttctatctcggcaaaagcatcgctaacggcgatttc
gttcactacccgaatgaaaaatggttccctattccagaagatgatgcgttgccagaaggt
attctggatgcccgtctgcaccagttttacgatcctgagcaggaactgagcgccagcgat
ctgatcgatctgcaatccggcaatgccgacagaggcatttgcgcgctgccatttacgcgt
cagtccgatcagcaaactgtctatattccgatgaacatcatcggtaacctgtacgtttct
aacgggatgtccgcaggtaacaccgccaacgaagcccgcgttcaggggctgtctgaagtg
tttgagcgtagcatcaagaaccgcatcattgccgaatccatcagcctgccagaaattccg
caagcggtgctgaaccgctaccctggcgtggtcgaagcgattgcaacgctggaaaaagaa
ggtttcccgattttctcttacgatgcctcactgggcgggaaatatccggtcatctgcgtg
gtgctgtttaacccggctaacggcacctgctttgcctccttcggcgcacaccctgacttc
ggcgtggcgctggagcgtaccgtcaccgaactgctgcaaggtcgcggcctgaaagatctg
gacgtgttcacgccgccgacgttcgatgatgaggaagtggccgagcacgccaatctggaa
acccactttatcgattccagcggtctgatctcctgggatatgttcaagaaagaagcggat
tatgaatttgccgactggagctttaaagggtcgacagaagaagaattcgctacgttgatg
gcgatcttcaaacaggaagataaagaagtctacattgctgactatgagcatctgtctgtt
tatgcctgccgcatcatcgtgccgggaatgtcagacatctaccctgccgacgatctgttg
ttagccaataacagcatgggcgctcacctgcgtgacacgctgctggcgctgcctgacagc
aaatgggaacaagaagactatctggcgctgttgcaacagttggatgacgaagggctggac
gacttcacccgcgtacgcgagctgctcggcattgctaccggaaaagataatggctggttt
acgctgcgcgttggcgaactaaaagccatgctggcactggccggtggcgatctggatcag
gcattaagctggacagagtggacacaggacttcaacgactccgtctttacggcacagcgc
agcaactactaccgttgcctgcaaacgctgctgttactggcgcaagagcctgagcgcgat
ccggcagaatattacgatgcctttaccaaaatgtacggcagtgagaccgtcgatgccgct
agcgctgctgttgctggcgaagcgtgcttctatggtctgtttgccgtcgatgacaccttc
acttctttacctgcgcaccagtcgctgctggcagcctatgaaaaactgcaacaggcgaaa
cgtcgttattggcaagcaaaataa
DBGET
integrated database retrieval system
