Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_017870
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Entry
PCC21_017870 CDS
T02320
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcc01002
]
PCC21_017870
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcc01011
]
PCC21_017870
Peptidases and inhibitors [BR:
pcc01002
]
Cysteine peptidases
Family C82
PCC21_017870
Peptidoglycan biosynthesis and degradation proteins [BR:
pcc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PCC21_017870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AFR03190
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All DBs
Position
2022545..2024281
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AA seq
578 aa
AA seq
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MLLLHKRKMVRLLLRVGCIWVGSLSPSFSVLAASPTVVSGLSQSSGVVSVENSRAGLLAA
LPHGMTLHYLSDLSSLYAQHQMQPMWADNRAVQQFQQQLAELAIAGVQPQFTTWVTWLTD
PQLTGFARDAVLSDAMLGYLQFVSGVERSGNDWLYSSVPYRLQSPALNVVSQWQQAVKSG
TSAAYVVSLAPQHSQYAKMHEALKTMLTDNRPWPSLNLAESLRPEQQSRELAVLREILQR
TGMLSSTESITLFNENTAATTVSTGQAPLVEGGAIDDRYTGELVDAVKRFQHWQGLEDDG
VIGKRTRDWLNVSPQMRATLLALNIQRLRLLPDNVHTGIMVNIPNYSLIYYQDGAERLSS
RVIVGQPKRKTPLMSSSLYNVVVNPPWNVPTTLTRQDIIPKVVRDPGYLQRHGYTVLSGW
SQDAEAIDPSMIDWPMVSAERFPYRLRQAPGANNSLGRYKFNMPNSEAIYLHDTPNHNLF
QRDIRALSSGCVRVNKASELASMLLQDAGWNNSRISSTLDQGNTTFVSMKHRIPVNLYYL
TAWVAEDGRPQFRTDIYNYDDTARAGTKVLSRAGLLLQ
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgttacataaacgaaaaatggtcaggctgctgttacgcgtgggttgtatttgg
gtcggaagcctgtctccttcgttttcggtgctggcagcatctccgacggtggtatccggc
ttatcgcaaagctcgggcgtggtgtctgtagaaaatagccgtgcagggcttctggccgcg
ctgccgcacggtatgacgttacattatctctctgatttatcatcgctttatgcccaacat
cagatgcaacctatgtgggcagataaccgtgcggttcaacagtttcaacaacagctggct
gaattggcgatagctggcgtacaaccgcagttcactacgtgggtaacctggctgaccgat
ccgcaattgaccggatttgcgcgcgatgccgtgctctcggatgcgatgctgggctatttg
cagttcgtttcgggtgtagaacgtagcggtaatgactggttgtacagcagcgtaccttac
cgtctgcaatcgccggcgctcaatgtcgtttcgcaatggcaacaggccgtgaaatctggc
accagcgcggcctatgtcgtttcgctggcaccacagcattcgcaatacgccaaaatgcat
gaagcgctgaagacgatgctgacggacaatcgcccgtggccgagtctgaatctggcggag
tctctgcgcccggaacagcagagtcgggaactggcggtactgcgtgaaattctgcaacgt
actggcatgctgtcttcaacggagagcattacgctatttaacgaaaataccgccgcgacg
acggtatcgaccgggcaggctccgctggtcgagggcggtgctatcgacgatcgttatact
ggcgaactggttgacgcggttaaacgcttccagcactggcaagggctggaggatgatggc
gttattggtaagcgtacgcgtgattggctcaatgtgtccccgcaaatgcgtgcaacgctg
ctggcgctgaatatccagcgtctgcgtctgttaccggacaatgtccacaccggtatcatg
gtgaacatccccaattattcactgatctattatcaggatggcgctgaacgcctgtcatcg
cgcgtcattgttgggcagcctaaacgcaaaacgccattgatgagcagctcgctgtataac
gtggtggtcaatccgccgtggaatgttcctacgacgctgactcggcaggacatcattcct
aaagtcgtacgcgatcccggctatctacagcgtcatggctacacggtgttgtccggctgg
agtcaggatgctgaagcgatcgatccttccatgatcgattggccgatggtgtcagcagag
cgcttcccttatcgactgcgtcaggccccaggtgcgaataactcgctgggacgctataaa
ttcaatatgccgaattcagaagcgatttatctacacgacacgcctaatcacaatctgttc
cagcgtgatatcagggcgcttagctccggctgcgtgcgggttaataaagcatcggaactg
gctagcatgttattgcaggatgcaggatggaataatagtcgtatttcttccacgctggat
cagggaaataccacttttgtgtcaatgaaacatcggattccggtcaacctctattacctg
accgcgtgggtggctgaagacggtagaccacagttccgaacagatatttacaattatgat
gacaccgctcgtgcagggacgaaagtgctgtccagagcagggctgttgcttcagtaa
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