Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_018380
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Entry
PCC21_018380 CDS
T02320
Name
(GenBank) DNA-binding transcriptional regulator HexR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcc03000
]
PCC21_018380
Transcription factors [BR:
pcc03000
]
Prokaryotic type
Helix-turn-helix
Other families
PCC21_018380
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_24
MarR
HTH_Tnp_ISL3
Penicillinase_R
HTH_29
HTH_Crp_2
Nuc_deoxyri_tr2
TrmB
Motif
Other DBs
NCBI-ProteinID:
AFR03241
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Position
complement(2083253..2084122)
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AA seq
289 aa
AA seq
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MNMLEKIQSHLELLSKSERKVAEVILSTPQTAIHSSIATLAKMADVSEPTVNRFCRRLET
KGFPDFKLHLAQSLANGTPYVNRNVEEDDSVDAYTSKIFESAMAGLEQVKSSLDVTAVNR
AVDLLTQAKKISFFGLGASAAVAHDAMNKFFRFNIPVVYFDDIVMQRMSCMNSSDGDVVV
LISHTGRTKSLVEMAQLARENDATVIAITSDGTPLAREASLALRLDVPEDTDVYMPMVSR
IAQLTLIDVLATGFTLRRGEKFRDNLKRVKEALRESRFDKDERLINPFR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgctggaaaaaatccagagccacctggaactcctgagcaaatcagaaagaaaa
gttgctgaagtgatcctgagcacgccacaaacagccattcactccagcatcgcgacctta
gccaaaatggccgatgtcagcgagccaacggttaatcgtttctgtcgccgccttgaaact
aaaggttttcccgattttaaactacatctggcgcaaagtctggcaaacggtacaccgtat
gtgaaccgtaacgttgaagaagatgacagcgttgatgcctataccagtaaaatttttgaa
tccgccatggctggcctggagcaggtgaaatccagtctggatgtcaccgccgtcaaccgc
gccgtggatttgctaacacaggcgaagaaaatctctttctttggcctgggcgcttccgcc
gctgtcgcacatgatgcgatgaacaaatttttccgcttcaatatccccgtcgtctatttc
gatgacatcgttatgcagcgtatgagctgtatgaattccagcgacggcgacgtcgtggta
ttgatctcccatactggcagaaccaaaagtctggtcgaaatggcacagctggcacgcgag
aacgacgcgaccgtcatcgccatcacctcggacggcacgccgctggcgcgtgaggcgtcg
ttggccttgcgacttgatgtgcctgaagataccgatgtctacatgccgatggtgtcccgc
atcgctcagttgacgttgatcgacgttctggcgaccgggttcacgctgcgccgcggggaa
aaatttcgtgataacctgaaacgggtcaaagaggccctgcgtgaatctcgctttgataaa
gacgagcgattgattaatcccttcaggtga
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