Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_020730
Help
Entry
PCC21_020730 CDS
T02320
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcc03032
]
PCC21_020730
03400 DNA repair and recombination proteins [BR:
pcc03400
]
PCC21_020730
Enzymes [BR:
pcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PCC21_020730
DNA replication proteins [BR:
pcc03032
]
Prokaryotic type
DNA Topoisomerases
PCC21_020730
DNA repair and recombination proteins [BR:
pcc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PCC21_020730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AFR03476
LinkDB
All DBs
Position
2336379..2338979
Genome browser
AA seq
866 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHVRDLPTSGSVSKKSADSTTKDKTKKKV
KKDEKSALVNRMGVDPYHGWKANYEILPGKEKVVSELKTLAENADHIYLATDLDREGEAI
AWHLREIIGGDDQRFSRVVFNEITKNAIKQAFEKPDTLNIDRVNAQQARRFMDRVVGYMV
SPLLWKKIARGLSAGRVQSVAVRLIVDREREIKAFVPEEYWELHADLLAGSDIQLQMQVT
HHNGKPFKPVNKEQTHAAVSLLEHARYVVADREDKPTSSKPGAPFITSTLQQAASTRLGF
GVKKTMMMAQRLYEAGYITYMRTDSTNLSQDALTMVRGYIGEEFGKRYLPESANLYSSKE
NSQEAHEAIRPSDVGVLADNLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLIVEAAD
YQLRAKGRTLRFDGWTKVMPALRKNDEDRTLPTVAVGESLSLQKLLPGQHFTKPPARYSD
ASLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMN
YDFTARMESRLDQVANNQAEWKAVLDEFFNEFSQQLEKAEQDPEEGGMRPNAMVLTSIDC
PTCSRQMGIRTASTGVFLGCSGYALSPKERCKTTINLIPETEVLNVLEGDDAETNALRAR
RRCEKCGTAMDSYLIDNQRKLHVCGNNPACDGYEIEAGEFRIKGYDGPIVECEKCGSEMH
LKMGRFGKYMACTSETCSNTRKILRNGDVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGV
FLAANTFPKSRETRAPLVEELVRFKDRLPEKLRYLAEAPVVDKDGNKTQVRFSRKTKQQY
VSSEKDGKATGWSAFYIDGKWVEGKK
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgttatcgtcgagtccccggcaaaagccaaaacgatcaataagtat
ttaggcaatgactacgtggtgaaatccagcgtcggtcatgtgcgcgatctgccgacgagt
ggctcagtcagtaaaaagagcgcggactcaacgactaaagataaaacgaaaaagaaagtc
aaaaaggatgagaaatccgcgctagttaatcgtatgggcgtcgacccttatcatggctgg
aaagccaactacgaaatactgccgggtaaggagaaggttgtctccgaattaaaaacgctg
gcggaaaatgctgaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccatt
gcctggcacctgcgggaaatcattggtggtgacgatcagcgtttcagccgcgtggtgttt
aacgaaatcacgaaaaatgccattaaacaggcgtttgaaaaacccgatacgttgaatatt
gaccgcgttaatgcccagcaggcgcgtcggtttatggatcgcgtggtgggctacatggtt
tccccgctgctgtggaaaaaaattgcccgtggcctgtccgctgggcgcgtacagtcggtt
gccgtgcgcctgattgtcgatcgcgagcgcgaaatcaaagcgttcgtgccggaagaatat
tgggaactgcacgctgatttgttggcaggcagcgatattcaactgcaaatgcaggtgaca
caccacaacggcaagccgtttaaaccggttaataaagaacaaacgcatgcggcggtcagt
ctgcttgaacacgcgcgttatgtggttgccgatcgtgaagacaagccgaccagcagcaaa
ccgggcgcgccgttcatcacctccacgctgcaacaggctgccagtacgcgccttggcttc
ggcgtgaaaaagaccatgatgatggcgcagcgtctgtacgaagcaggttacattacctac
atgcgtaccgactcaacgaacctcagtcaggatgccttgacgatggtgcgtggctatatt
ggtgaagagtttggcaagcgctatctgccggagtcagcgaacctttacagcagcaaagaa
aactcgcaggaagcgcacgaagcgattcgtccttctgatgttggcgtgctggctgacaac
ctgaaagatatggaagccgatgcacagaagctgtatcaactgatttggcgtcagttcgtc
gcctgccaaatgacgcctgcgcaatacgactccaccacgctaatcgtcgaagctgccgat
tatcaactgcgtgccaaaggccgtacgctgcgtttcgatggctggacaaaagtcatgcct
gcgctgcgtaaaaatgatgaagatcgtacgttgccgaccgtggctgtgggcgaatcgctg
tcgctgcagaagctgctgccagggcaacacttcactaaaccaccggctcgttacagcgat
gcctctttggttaaagagctggaaaaacgtgggattggtcgtccgtctacctatgcttct
attatttccaccattcaggatcgcggctacgttcgagtggaaaaccgccgtttctatgcc
gagaaaatgggtgaaatcgttaccgatcgactggaagaaaacttccgcgaactgatgaat
tacgatttcaccgcacggatggaaagccgtctcgatcaggtcgccaataatcaggcggaa
tggaaagcggtactggatgaattcttcaacgaatttagccagcagttggaaaaagcagag
caggatcctgaagaaggcggtatgcgccccaatgcgatggtgttaaccagcattgattgc
ccaacctgctctcgtcaaatgggtatccgtactgccagtaccggggtgttcctgggctgc
tccggctatgcactgtcgccgaaagagcgctgtaagaccacgatcaacctgataccggaa
actgaagtactgaacgtgttggaaggcgacgatgccgaaaccaacgcgttacgtgcccgc
cgtcgctgcgaaaaatgtggtacggcgatggacagctacctgattgataatcagcgcaag
ctgcacgtgtgcgggaataacccagcctgtgacgggtatgagatcgaagcaggtgagttc
cgcatcaagggctatgatggcccgattgttgagtgcgagaagtgtggttccgaaatgcac
ctcaaaatgggacgtttcggtaagtacatggcgtgtaccagcgagacctgtagtaacacg
cgtaagatcctgcgtaatggcgatgttgcgccaccgaaagaagatccggtgccgttgcct
gagctgccttgcgagaagtctgatgcctatttcgtcttgcgtgatggcgcagcaggcgtc
ttccttgcggccaatacgttcccgaaatctcgtgaaacgcgggcaccgctggtagaagaa
ctggtgcgattcaaagatcgtttaccggagaaacttcgctatctggcggaagcgccagtg
gtcgataaagacggcaacaaaacgcaggtgcgtttcagccgtaagaccaaacagcaatat
gtctcgtcagagaaagacggcaaggcaacgggctggtcagcgttttacatcgatggaaaa
tgggttgaagggaagaagtaa
DBGET
integrated database retrieval system
