Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_021660
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Entry
PCC21_021660 CDS
T02320
Name
(GenBank) helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
PCC21_021660
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
TackOD1
Motif
Other DBs
NCBI-ProteinID:
AFR03569
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Position
complement(2442587..2448529)
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AA seq
1980 aa
AA seq
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MNNPLETFESIRDFYISYLETAFRIGSSDIQSERRALLEQQGTLCADLFLEPMPRYQHYG
LTISELRNDAQGQTWLPGFNAQQRAAFIDLCLGGLLPHNKTDPTKGRFNLYTHQLDMLKR
GVQPGKPGIVTSGTGSGKTESFLLPVLAQIAKEATGWPQSPALKRWQPWWHNVADKQPSF
MRGHEAASRPKAVRALILYPMNALVEDQLVRMRRALDSSEAHEVMDAHFGGNRIFFGRYT
SATKVTGWLKHPRLSEEKNEKKRVAKKITELREYMQLTEETHQEAVRQARQNKDNELSFN
FPRTAGGEVLSRWEMQKTPPDILITNTSMLSTMLVREVDDPIFEQTRQWIERDPDAYFYL
ILDELHLQRGTAGTEVSYLLKHLINRLGLDQEKHRHKLRILASSASLPVEGPEGEQSVEY
LWGMFGQRGLPSGASSSDWKECIIKGDPLPPGNMSLFQGDLEAFYHAVLQLQQAPLTSLQ
HWQNVACTMRMAASEVSTEQLAQRVVLQAANLLESGCYTDDHSPRATSIKMLSSRIFSAQ
PNSEKALRALIWLRSTEGDWPQWFSHAFPDDIGAPRFRAHAFLRALEGLYAAPLPAPSAA
SSQEINHRYFGDLTVESGLRYGKDKKSRRVELLYCECCGNLFLGGKPSVFSGSESRIELL
PNDPDTEQLPEHAKSVIVERRSAEEYALFMPVVERFWPKGDETLNGDDAFGTWGKASYDP
FTATIQHPVSLLKLLPENHIAGWFYYVKPGEFTSPERGQSSSQSPGTALPFQCPACGTSY
KYGKGKLSPIRSFRVGFSKTTQLLASSLMAELQRSGNREQLVTFSDSRQDAARAALDLES
GHHDDVRREIVVHSLQSIAADKPSHNQLKIRQAEIENRNKTLINLNVRSDEEEDELDRLA
DERKKIRALLSKPEADSIPLREILEPESPDAGQPLGLLLRAQVDAGIHPSDRTGIAPVPD
PEKHEEGTLTFAWQQLFEKNAQGAWCWKALPSYEDNLLVARQEISRDLKRLVGESVFSKT
YFALEESGWGYPCLPITGNDSREQLAIYDAMFRVLADAYRVTPSQYTTKETRWSSARDVN
RRNRLYRFTQAICQRSGGEPLSLIDSFLRRLELVGHLGGIIDIGKMHFRLAEPTDRVWRC
SHCGRIHMHTGAGICTRCHFPLPETPCSEAKTLQMQHYLGKRLSHSSGVHRMRSEELTGM
TENPAARLRRFKGILIADDDDILPEGMKDFAPDRDLDRAARVVDVLSVTTTMEVGVDIGD
LRAVFQANMPPQRFNYQQRVGRAGRRGQAFSFVLTACRSKSHDLFYFRHPEKITGDLPPP
PFLTTKLEMICQRLVRKIWLVSTFKWLRQQTEKADHPWPVDDYAHTPDNHGEFFPVHWLK
ENQADWLPKIRRAIEATILARDEFARTCTQQDPHLFQKIIQPLTPDQLIQDINAVLNDSA
MEAKGLAEALAEHGKFPMYGMPTRSRLLLTRPVSTGEKEIEFASMDRDLDIAIQEFAPGK
ILVQDKRRYFTAGYSGMLKQSRKNPRSFYSNACEPGELRIMTACPVCNIWAPANAQATEC
TICGAVMDKAERYQCYVPYGFITTLEPKSAKEDFDQILTTASRVSIAEAYTFSAMPEPDV
NVAIQLQPQTCLHRLNRGIYTDKTWRGFNATQGSLSVPFRKEGTYQPLWANRVWMDSQII
ETDLLVKNRFTDRGENLNTFYLAAPKVTDLLALRVAQTPPGLRLQYSTLTPAFRAAALSA
SFIIVNYASKELLDIDPEEIEILEPRVQMLKNGKSVPVLQMADRLVNGSGLCERLQQKGS
SGSLIILEIMKKILNNKTAYPLAEFLQPDHRERCFQGCYHCLHRYGNQPYHGLLDWRLGL
DVIQLLQDQTYNAGLNGDFTSPGVSDWPENALRLAKEAASLYSDSDVKVMGNIPVIRTGD
GRWAAVLHPFWDPDAAFVANPELEAFSYEVDVDATNTFALSRRMGTEMAKLRTQASSSQE
NT seq
5943 nt
NT seq
+upstream
nt +downstream
nt
atgaataacccactggaaacatttgaatcaataagagatttttatatttcgtaccttgaa
acggccttccgtattggttcatcagacatacagtctgaacggcgagcgttactggaacag
caagggacattatgtgccgatctatttcttgaaccgatgccacgatatcagcactatggc
ttaactatcagcgagttacgaaatgatgctcagggtcagacatggttgccagggtttaat
gcgcaacaaagggcggcattcatcgacctctgtttaggtggacttctgccccacaataaa
acggatccgactaagggacgttttaatctttatacccatcaactggacatgttgaaaaga
ggggtacagccagggaaaccgggcattgtcacctccggaaccggttccggtaaaaccgaa
tcatttttactgccggttctggcgcagatcgcaaaagaagccaccggctggccgcaaagc
ccggcgttgaagcgctggcaaccgtggtggcataacgtagcggataaacagcctagcttc
atgcgcgggcatgaggccgcttcacgtccgaaagcggtacgcgcgctgatcctctacccg
atgaatgccttggtagaagatcaactggtacgtatgcgacgggcactggattccagcgaa
gctcatgaggtcatggatgcgcattttggtggcaaccgaatcttttttggccgttatacc
agcgcaactaaagtaactggctggctcaaacatccccgactcagtgaagaaaaaaatgag
aaaaaacgcgtggctaaaaaaatcactgagctacgtgagtatatgcaattaacggaagag
acccatcaggaggcggtacgacaagcgcggcagaacaaggataacgaattatcgtttaat
ttccccagaaccgctggcggagaggttctcagccgctgggaaatgcaaaagacaccgccc
gatattctgatcaccaacaccagcatgctctcaacgatgctggttcgtgaggtggacgat
cctatttttgaacaaacccgacagtggattgagcgcgaccctgatgcctatttttatctt
atccttgacgaacttcatctacagcgaggaaccgccggtaccgaagtcagctacttgctt
aagcatttgatcaaccggctggggctggatcaggaaaaacaccgacacaaattgcgtatt
ctggcctccagtgcctctttacccgttgaaggtcctgaaggcgaacaaagcgtcgaatat
ttatgggggatgtttggtcagcggggattaccttcaggagcctcctccagcgactggaag
gaatgtattatcaagggagacccccttcccccgggcaatatgtctcttttccagggggac
ctggaggcgttttatcacgcagtgcttcagttacagcaagcaccacttacatcattacaa
cactggcagaatgtcgcctgcaccatgagaatggcagccagtgaagtctctacagagcaa
ctggcgcaacgtgttgtcttacaggcagccaacctgcttgaaagtggctgctatacggac
gatcattctccgagagccacgtcaatcaaaatgcttagttcacgcatatttagcgctcag
cccaatagtgaaaaagcgctccgggcattaatctggttacgctcgactgagggagactgg
ccgcaatggttttcacatgcctttcctgatgatatcggtgcgccgcgtttccgcgcgcat
gcttttttgcgtgcacttgaagggttatatgctgcgccattgcccgcccctagcgctgca
tcttcgcaagaaatcaatcaccgctattttggcgatcttaccgtagagtccggcttacgt
tacggcaaagataaaaaatcgcggcgtgtcgaattactctattgtgaatgttgcggtaat
ctctttttggggggtaaaccttcggtcttttccggttcagaaagtcgaattgaactgtta
cccaacgacccggatacggagcaactgcccgaacacgcaaaatcagtcatagtagaacgt
cgatctgctgaagaatacgcgctatttatgcccgtcgtagaacgtttctggccgaaaggc
gacgaaacgttaaatggcgacgatgctttcggtacatggggcaaagccagctacgatcca
tttaccgccaccattcaacacccagtatcgctcttaaaactgctaccggaaaaccatatc
gcgggctggttctattatgtcaaacccggtgaatttacctccccggaaagaggccagtca
tccagccagtcgccgggaacggcgctaccttttcagtgtccggcatgtggtacatcctac
aaatacggcaaaggtaagctctccccaatccgtagttttcgcgtcggtttttcgaaaacg
acacagctactggccagctcgctaatggcggaactacagcgatcgggtaaccgtgagcaa
ctggtaacgttttcagacagtcgtcaggatgccgccagggcggcactcgatctggaatcg
ggtcatcatgacgacgtcagacgagaaattgttgtccattctctacagtccattgcggct
gataaaccgtcccataaccaactaaaaatacgccaggcagagatagagaaccggaacaaa
acgctgattaacctcaacgtaaggtcggatgaagaagaggatgagctggatcgactcgct
gatgaacgaaaaaaaatcagagcgttattatcaaaacctgaagctgacagcattcctctg
cgtgaaattctcgaacctgaatcaccagatgcaggccaaccgcttggcctgctgttaagg
gcgcaggtagatgcaggcattcacccttccgatcgtactggtattgcgccggttcctgat
cctgaaaaacatgaagaaggcacgctgacctttgcatggcaacaactctttgaaaagaac
gcgcagggggcgtggtgctggaaggcgcttccatcctatgaagacaacctgctggtggca
cgacaggagatttcacgcgatctgaaacgactggtgggagaaagcgtattcagtaaaacc
tacttcgcgctggaagagtctggctggggttatccctgccttcccattaccggaaacgac
tcacgggaacagctcgcgatttatgacgcaatgtttcgagtgttggcggacgcataccgg
gttaccccttcacaatacacaacaaaggaaacacgctggagttcagcgcgcgatgtcaat
cgtagaaaccgtctgtaccgttttacgcaggcaatatgccagcgttcgggaggcgagcct
ttatctttaattgatagttttctgcggcgactggagctggtgggtcatctgggcggcatt
attgatattggcaaaatgcactttcggctggcggaacctaccgatcgcgtctggcgctgc
tcccattgcgggcgtatacacatgcacaccggtgcgggaatttgtactcgctgccacttt
cctttaccagaaacgccgtgcagcgaggcaaaaacgctccagatgcaacactatctcggc
aaacgcctctcacattcatctggtgttcaccggatgcgctcagaggaactgactggaatg
accgaaaacccggcggcaaggctacgccggtttaaaggtattctgattgccgacgacgat
gatattttaccggagggaatgaaagattttgcgcccgatcgagaccttgaccgggcagct
cgcgtggtcgatgtgctttccgtaaccacaaccatggaagtgggagtggatatcggtgat
ttacgcgcggtctttcaggctaacatgcctccacagcgctttaattatcaacagcgtgtt
ggacgtgccggacgacgcggacaggcgttttcattcgtattaaccgcgtgtcgcagcaag
agtcacgatctgttttacttccgccatccggaaaaaattaccggcgacctccctccgcca
ccgtttttgaccacaaagctggaaatgatctgccagagactggtacgaaaaatctggctg
gtgtcgacattcaaatggttaaggcagcaaacggaaaaagccgatcacccatggccggtt
gacgactacgcgcacacccctgataaccacggtgagtttttcccggtacactggctgaaa
gaaaaccaggcggactggctgccaaaaatccggcgggccatcgaagcaactatcctggcg
cgcgatgagtttgcccggacttgcacgcagcaagacccccatttgttccagaaaattatt
cagcctttgacgccggatcaactgattcaggatattaacgccgtactgaacgacagtgcg
atggaggcgaaagggctggcagaagcgctggctgaacacggtaaattcccaatgtatggc
atgccgacccgatcacgcctgttgctgacaaggcctgtcagcacaggcgaaaaagagatc
gaatttgccagcatggatcgcgatctggatattgcgatacaggaatttgcccccggaaaa
attctggttcaggacaaacgacgctactttacggcaggttatagtggaatgcttaaacag
agcagaaaaaatccacgatcattttattcaaatgcctgcgaaccgggtgaactcagaata
atgaccgcctgtccggtgtgcaacatctgggcccctgcaaacgcgcaggctaccgaatgt
actatctgcggcgccgttatggataaagcggaacgttatcaatgctatgttccttatgga
tttatcaccacgctggaaccaaaatcggccaaagaggattttgatcagatcctgaccacg
gccagtcgtgtatcaattgcagaagcctacactttttctgcaatgccagagcctgacgtt
aatgtggcgatacagcttcagccgcagacatgtctgcaccgcctgaatcggggaatttat
accgataaaacatggcgtggtttcaacgcaacacaggggagcctatcggtccctttcaga
aaggaggggacttaccagccgctttgggcgaaccgggtttggatggatagtcaaatcatt
gagaccgatctgttagttaaaaaccgctttaccgatcgaggggaaaacctaaacacattt
tatcttgccgcgcctaaagtgactgatctactggcgctgagggttgctcaaaccccgccg
ggtctccggctacagtattccacgctaaccccggcattcagggcggctgcgctctcggca
tcttttatcattgttaactatgcatcaaaagagctgctggatattgatcctgaagaaatc
gaaattctggaaccccgcgttcaaatgctgaaaaacggtaagtctgtaccggttctgcaa
atggctgatcgtctggttaatgggtcagggttatgtgaacggctacagcagaagggatca
tccggttctctcattatccttgagatcatgaagaagattttaaataacaaaacggcctac
ccactagctgagtttctgcaacccgatcatcgcgaacgctgctttcaggggtgttatcac
tgtctgcacaggtacggaaaccagccgtatcacggattgctggactggcgtctgggactg
gatgtcattcaacttcttcaggatcaaacctataacgccgggctgaacggtgattttaca
tctccgggcgtctctgactggccggaaaatgccctacgattagccaaagaggccgcttcg
ctatacagcgacagtgacgtaaaagtgatggggaatatacccgtgattcgtaccggggac
gggcgctgggccgccgtactacatccattctgggatcccgatgctgcatttgttgcaaac
cccgaacttgaggcattttcatatgaggtggacgtagacgcgacgaatacttttgcattg
tcccgccgcatggggactgaaatggcgaaattacggactcaggcgtcctcatctcaggag
tga
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