Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_022190
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Entry
PCC21_022190 CDS
T02320
Name
(GenBank) transcriptional regulator, LacI family
KO
K03487
LacI family transcriptional regulator, asc operon repressor
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcc03000
]
PCC21_022190
Transcription factors [BR:
pcc03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PCC21_022190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
zf-C2H2_2
HTH_31
TetR_N
HTH_IclR
MarR_2
Sigma54_DBD
TrmB
HTH_Tnp_ISL3
DUF7343
HTH_10
HTH_38
HTH_6
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AFR03622
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Position
2509735..2510760
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AA seq
341 aa
AA seq
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MSTMQEVAKKAGVSKATVSRVLSGKGYTSEETKTLVYQAIEETGYRPNLLARNLATSKSA
CIGLVVTNTLYNGSYFNELLSQAAKKLEDNGRQLILVDGKHSADEERAAIQFLLGLRCDA
IIIYPRFLTVDEMDDIIEKHKQPIMVVNRKLRKHQSHCICCDHKGSSYNATQHLIARGHR
DIAFITGSLDSPTAIERLSGYKDALTAANIAVRDELIVKGKWTPRSGSLAINALRDNRVS
FSAVLASNDDMAIGAIKALDDAGVAVPHDVSVVGFDDIPTAPFLKPSLSSVKDPVSDMIN
EVINRLIAMLDGGYFSKDNLFLSELQVRDSIQNGPYSNPPV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaatgcaggaagtggcgaagaaagcaggcgtatcgaaagcgacggtgtcgcgc
gtgctatcgggcaaaggctataccagtgaagaaaccaaaacgctggtctatcaggccatt
gaggagacgggatatcggccaaatttactggcgcggaatctggcgaccagcaaatccgcc
tgtattggtttggtggtaaccaacacgctctataacggcagctattttaacgagctgctg
tcacaggccgccaagaaattggaagacaacgggcgccagctaattctggtcgatggcaaa
cacagcgccgatgaagagcgcgccgcgattcaattcctgctggggttacgctgtgatgcg
atcatcatctatccccgttttctcaccgtggatgaaatggacgacatcatcgagaagcac
aagcagccgatcatggtggttaaccgtaaactgcgtaaacaccagagccactgcatctgc
tgcgatcacaaaggttccagctataacgcgacgcaacatctgattgcgcgcggtcataga
gatatcgcgtttatcaccggttcgctggattcgccgaccgctattgaacgtctttccggc
tataaagacgccctgacggcggccaatatcgcggtacgggatgaattgattgtgaaagga
aaatggacgccgcgcagcgggtcgcttgccattaacgccctgcgcgataaccgggtctcg
ttcagcgccgttctcgccagcaatgacgatatggcgattggcgcgataaaagcgttggat
gacgctggcgttgccgtaccgcacgacgtttctgtcgtcgggttcgacgatattcccacc
gccccgtttttgaagccgtcgctctccagcgtcaaagatccggtgagcgatatgatcaac
gaagtgattaaccgcctgatcgcgatgctggatggcggctatttctcgaaagacaatctg
ttcttgtcagagctacaggtcagagattccattcagaacgggccgtacagtaacccgccc
gtttga
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