Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_022630
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Entry
PCC21_022630 CDS
T02320
Name
(GenBank) type III effector protein
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase
Motif
Other DBs
NCBI-ProteinID:
AFR03666
LinkDB
All DBs
Position
2580126..2581607
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AA seq
493 aa
AA seq
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MADMTITLSIQPGAGLSSTGLNSPLSGSNGGASPRSAQQDSQLMEALGTLLSALLPNAQG
NMPSSTDGSPLGQTGAGNGGSSPLGQNGNPADMLMKLLETLIPGKNGQEAGNPLSSGSSG
AAGGSGGASPLAGPSSTGGAGGAQNPENLSRSLLQDSAGSALDNAISPTADGGGQLSGNA
LLKALMELIGNLMDSQKGEFGQPQEKGQSQGGGSPSVGAPQASSGGGGGSPAALSAPSAS
GGGSPAAPSASSSPVGGNGGGASAPLTAAPTGVDGGSAASPTTSTAGAGPVAFPKASGDA
TVVNDTIKVGPGEVFDGGGKTFTAGSKLGDGGQAEGQKPVFELAPGATLKNVVFGDNAAD
GVHVRGDAKIDNVHWTNVGEDALTVKSNTGKPANVEITNSSAQGASDKIFQLNADANLTI
DNFKAKDFGTFVRTNGGQQGNWNLNLSNIDAENGKFSFVKSDSEGLNVKGSNINLTNVNN
HYKVPDSANLQVK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggctgatatgacgatcacgctcagcatacaacccggcgcaggcctgtcatcaacaggt
ctgaattccccgctgtcaggcagcaacggcggggcatcgccacgctctgcacagcaggat
agccagctcatggaggcgctgggcaccttacttagcgcgctcttgcctaatgcgcagggc
aatatgccgtcatcaaccgatggcagtccactgggccagactggcgcaggcaacggcggc
agctcgccattaggtcaaaatggcaaccctgccgatatgctgatgaaactgctggaaacg
ctgattccgggcaaaaatgggcaggaagcgggtaacccactctcttccggttcgtcaggc
gcggcaggcggcagtggcggtgcctcaccgctggcgggcccatccagcacggggggcgca
ggcggtgcacaaaacccagaaaatttaagccgttctctactgcaagattcggcaggcagc
gcattagataacgccatcagcccaacggcagacggcggtggccaactgagtggtaacgca
ctgttgaaagcgctgatggaattgatcggcaatctgatggattcacagaaaggtgaattc
ggtcagccgcaagaaaaaggacagtcacaaggtggcggatcgccatcggtgggcgcgccg
caggcttcctccggcggtggcggtggatcgcctgccgcactgtctgcaccttctgccagt
ggcgggggttcacctgctgcaccatcagcgtcatcttcacccgttggtggtaacggcggc
ggcgcgtctgctccactaaccgccgcaccaaccggtgttgatggcggttcggcagcctcg
ccgacgacgtcaacagcaggtgctggcccagttgccttccctaaagccagcggtgatgcc
actgtggtcaatgacaccatcaaagtcggccccggtgaggtctttgatggcggtggtaag
acctttactgccggtagtaagttaggcgacggcggccaggctgaaggccagaagccggtc
tttgaactggctcctggcgcaacgctgaaaaacgtggtgtttggtgataatgcggcagat
ggcgtacacgttcgcggcgatgccaaaattgataacgtacactggaccaacgtgggtgaa
gatgcgctgacggtaaaatccaataccggtaaaccagccaacgttgaaatcaccaacagt
agcgctcagggcgcttccgataaaattttccagttgaacgcggatgccaacctgactatc
gataatttcaaagcgaaagacttcggtacgtttgtccgcaccaacggtgggcaacagggt
aactggaacttgaatctgagcaacattgacgcagaaaacggcaagttctcgttcgtgaaa
agcgacagtgaagggttgaacgtcaaaggcagcaacatcaacctgacgaacgtcaataat
cactacaaagtgccagattccgccaacttacaggtgaagtaa
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