Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_024260
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Entry
PCC21_024260 CDS
T02320
Name
(GenBank) hypothetical protein
KO
K03721
transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcc03000
]
PCC21_024260
Transcription factors [BR:
pcc03000
]
Prokaryotic type
Other transcription factors
Others
PCC21_024260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_50
Sigma54_activ_2
ACT
PAS_8
AAA_2
AAA_5
PAS
ACT_4
HTH_36
PAS_4
HTH_38
AAA
ACT_AHAS_ss
HTH_Tnp_ISL3
TniB
HTH_11
HTH_ParB
AAA_7
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
AFR03829
LinkDB
All DBs
Position
complement(2744278..2745846)
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AA seq
522 aa
AA seq
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MHLEVICEDRIGMVRELLDLLASRNIDLRGIEIASIGRIYLNFATLDFDAFRLLMTEIRR
IDSVSDVRTVAFMPSEREHRALNALLESMPEPVFSLDMKGKLELFNPAALALFEQSAETI
SDLTIGSMIPGFNFASWLEKSSAVVAERVVIRGQDFLLEMTPVRLEDDAGKVATAGALVM
LKSAARMGRQLQNLAVNDENEFDHIVAVSPKMRQVVEQARKLAMLDAPLLIVGDTGTGKD
MLARACHLRGPRGKKPFLALNCAALPDDVMESELFGHAPGAYLNAQEGKKGFFEQANGGS
VLLDEVGEMSAQMQTKLLRFLNDGTFRRVGEDHEVHVDVRVICATKKNLLELVQRGEFRE
DLYYRLNVLSLTLPPLRERPADIMPLAELFVARFADEQGIPRPKLAADVEHFLPQYGWPG
NVRQLRNTIYRALTQLEGNELHMQDIDLPAFSIDAPQDETLLDGSLDDINKRFERSVLTR
LYQSYPSTRKLAKRLGVSHTAIANKLREYGLSQRKSAGDDEE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcatctggaagtgatttgtgaagaccgcattggtatggtccgtgaattgttagatcta
cttgcgtcacgcaatattgatttacgcggcattgaaattgcgtctattggtcgtatctac
ctcaattttgccaccctcgattttgatgctttccgtctgctgatgacggaaatccgccgt
attgacagcgtcagcgatgtgcgtaccgtggcgttcatgccgtctgagcgcgagcatcgg
gcgttgaatgcgctgttggaatcgatgcctgaacccgtattctcgctggatatgaaagga
aagctggagctgtttaaccccgcggcgctggcgctgtttgaacaatcggcagagaccatc
agcgacttgacgattggcagcatgatccccggtttcaatttcgccagttggctggagaag
agcagcgccgtcgtggcggagcgtgtggtgatccgtggtcaggatttcctgctggaaatg
acgcccgtccgtctggaagatgatgccggtaaagtggcaacggcgggcgcgctggtgatg
ctgaaatcggccgctcgcatgggccgacagttacagaacctcgccgtgaatgatgaaaat
gagttcgatcatatcgtggctgttagcccgaaaatgcgtcaggtggttgagcaggcgcgc
aaattagcgatgctggacgcgccattgctgatcgtgggcgatacagggacgggtaaggat
atgctggcgcgtgcctgccacctgcgcgggccgcgcggcaaaaaacctttcctggcgctg
aactgcgcggcgttacccgatgacgtgatggagagcgagctgttcggccatgcgcccggc
gcgtatctcaacgcgcaggaaggcaaaaaaggcttcttcgaacaggcgaacggcggttcg
gttctgctggatgaagtcggtgaaatgtcggcgcagatgcagaccaaattgctgcgtttc
ctgaatgacgggacattccgccgcgtcggtgaagatcacgaagtccatgtcgacgtgcgg
gtgatttgcgcgaccaagaaaaacctgttggagctggttcagcgtggtgagttccgggag
gatctttattatcgcctcaatgtactctcgctgacgttaccgccgctgcgtgagcgtccg
gcggatattatgccgttggccgagctttttgtggcgcgctttgccgacgaacaggggatt
cctcgccctaaactggccgcagatgtggagcatttcctgccgcagtacggctggccgggt
aacgttaggcaactgcgaaataccatttatcgcgcactgacgcagttggaaggcaacgaa
ctgcatatgcaggacatcgatctccctgcgttttcgattgatgcgccgcaagatgaaacc
ctgcttgatggctcgctggacgacatcaacaaacgtttcgagcgttcagtgctgacccgc
ctttatcaatcttatccaagcacacgtaaactggcgaagcggttaggcgtatcgcacacg
gcgatagccaacaaattgcgggaatatggactcagccaacgcaaatcggcgggggacgac
gaagagtaa
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