Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_024320
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Entry
PCC21_024320 CDS
T02320
Name
(GenBank) putative hemolysin
KO
K15125
filamentous hemagglutinin
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pcc00536
]
PCC21_024320
Glycosaminoglycan binding proteins [BR:
pcc00536
]
Heparan sulfate / Heparin
Microbial pathogens
PCC21_024320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
TPS
PT-VENN
ESPR
Fil_haemagg
SHOCT
Motif
Other DBs
NCBI-ProteinID:
AFR03835
LinkDB
All DBs
Position
2752716..2760515
Genome browser
AA seq
2599 aa
AA seq
DB search
MNKNLYRIIFNKARGLLMVVSDINRGQGKSGANGVGHTLSQLIGRMKPTAFLTMTALGLV
TLAPQALAAGIVADKSAPGGQQPNVMQSANGTPQVNIQTPSAGGVSHNKYTQFDVDNKGA
ILNNSHKQVQTQMGGWVAGNPWLAKGEAKIILNEVNSRDPSKLNGYVEVAGRKAQVVIAN
PAGISCDGCGFINANRATLTTGTPQMANGELRGYRVGKGEIVVEGAGMDSSRQDYTDLIA
RTVKVNAGIWAKDVTVTTGKNEVAADNNTVTASSATDSDSSDVKPTLAIDVAQLGGMYAG
KIRLVATEQGVGVSNKGTLGSQAGDITINANGDIVNSGTVNAGQDLLLGGKKVDNSGTLF
AQRDQSTTASEEVTNTGLIAAKGNTRVRSASIRNSKGAAIAAGMKTDGTLADSGNLTLAS
DGKLTSQGQALAGGNLNASASQIDLSGSDTAAHHTTLTSSSDIITDDAQLLASGDLKLSA
AGKLSNDRGVINANALQVSTPVISNRGGQLLQSGDSDLQLSSDSIDNQNGRIAANAKKFS
VQSASLNNQGGTIMAAGSGSLNVAASSELNNQNGTLAAASDLAIATPVLNNNQGQISANK
QLTLDQQNSSALARTAATGSDLRISNEGGRLVAGQQLTFRGREINGSGEILSLGDMDLSF
ADGFSNNNKTLANGDLTLNVNNSLINTALLGAGGKLNVQASNIDNQTTGELSSQQTTLNA
SDTLSNRGLIDGVLTRISASTVNNIGTGRIYGDGLAIGAATLNNLAENNSSATIAARQRL
DLGIGTLNNRDHSLIYSNGDIAIGGALDADALATGKAGEINNHSSTIESVGNMALSFTTL
NNINDNFATSMVQLSQRQKDEYMVVDLNNGVHYSPDDYNISFYKNEVRHICIEGVVCGRD
HYYQYSYTETISEEQIAQSDPAKIIAGGQISLSGDKLLNDKSQIIAGGTLLMAVRELVNT
EVTGQKLTEKVGQVIEWDRIHKKGKDSQKARASAYTPPTEIQSISLSPTVMKENTQATSS
APSLAEYAAQRVEVAGQNTDVIRSMTPDASLPTGSLFTPLPDATSSYLIETDPRFTNQRI
WLSSDYMLRQLQTDPSITQKRLGDGFYEQRLVREQIVELVGQRYLADYTSDEEQYKGLME
AGVSFAKQFNLVPGVALTAEQMKQITQDMVWLVAQDVKMPDGTTQNVLVPQVYAQVQQGD
MDGSGALLAGKNVSIGVSGGMLNSGRISATQLVSVSGDDIVNVGGIIAGKSVSLQATNDL
TNTGGTIRATDTLLAQAGRDITVASETNHAESQNGSNRFSRDNIDRVAGMYVQGDDGKLL
LQAGRDVNLQAAQVVSSGENSQTQIAANRDITMTTVTTGSSDKVVWDKDNHVTQTLTQVQ
GSEVTSDGNISLNAGNNINAQAAKLNADRQLALTATNDINLGSASSQEYLDMNSKVKGSG
FLSKRTTTTRAGYDATLANGSSLGGENISISAGNNLNITGSDVAADQDLALRTGNDLNVT
AAEESRDSWSMKKTTKSGLMSSGGIGFFVGSIKESSTSDTAALTHNNSTLGSVNGDTSLV
AGNNIAVQGSDVIAGNDINMVANNITIDAANNQSTTDTTYERKQTGLTLALSGAVGSAIN
AAYTSAKAADEQQDGRMASLQKLKSGLAGVQAAQAAVLASQNTADQNAIGVSLSLSTSKS
KSESHSEAVNASGSTVQAGNNINLVATGSENGADGDLTIGGSQLKAGNDVLLSANRDINL
LSAQNTQLQTGKNSSSGGGVGVSIGAGQGGAGISVFANASKGSGNENGEGLTHTETTVDA
GNKLTVNSGRDTTLRGAQLSADQVVANVGRDLTLQSEQDVNNYDSKQKNSSAGASFTFGS
MTGSVSASVAKDKIHSTYNSVQEQTGIFAGDGGFDITVGNHTQLDGAVIGSTASEDKNRL
DTGTLGFSNIDNSAEFEVSHSSVGISTGGLGAQDLLKNAVQNLAANGLGAGGSDGNASGT
TYAAVSPGSLIIRDQANQQQDVSTLSRDVEHANQSISPIFDKAKEQQRLSQLRLISDVVN
QGVDITLSQGQIMANNAGIKAAGEWDETKETRQEYWDRVQNTAAYKDINDQYKAGGELNK
GIRAAAAAITALAGGDPLKALAQGAAPYLSSTVRDLTLQNSDNPTAGQIAANAIGHAIVG
GVVAELSGSNATAGAVGAAGGELAARAIVDYLYPGKTVESLSDAERAKVSNLASLAATMA
AGLATDSSAGAVAGHDAGKNAVDYNLLSNKYGVEKLSKEGRALYEKLKAAGIGGMDELQE
RFTACGSNGKCQTDIRNEYRKLEKEAGEKLVAMYKSGAITADEFGYLVTDYARTMMYGAR
QGQLDSDYSGFIGDIYTQTGIDWTPMGIAGNPYVAAIKGSEQLAEWKAQGLSDEKIRELA
LKNDIITSAMTPVDVNGILSLYDNGASAQEVVKFAAGMAFNKVVQRTQSGNKGTSGTIGT
PATTAKNPLSPVQQRDVHGNEIVYRTMSPEQFRQFERTGVMPATTETSVSPVLSYSSKYD
GITVKITVKPGTFSELEKIGIAANSAAAKELPNMSTQTGKWMETNTRFKVEGGQMTTQLG
QGKGMEIFNKNIVHFEQVK
NT seq
7800 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagaacctctatcgcatcattttcaacaaggctcgcggcctgttaatggtggtt
tccgacatcaaccgcggtcagggtaaaagcggtgccaacggcgtcggccatacgctgagc
cagctgattggccgcatgaagcccaccgccttcctgaccatgaccgcactcggcctggtc
acgctcgcgccacaggcactggcggccggaattgtcgccgacaagagcgccccgggcggc
cagcaaccgaatgtgatgcagagcgccaacggcacgccgcaggtcaatatccagacgccg
agcgccggtggcgtttcgcataacaaatacacccagtttgacgtcgataacaaaggcgcg
attcttaataactcgcacaaacaggtgcagactcagatgggcggctgggtggcgggtaac
ccatggctggcgaaaggcgaagccaaaattattcttaacgaggtcaactcgcgcgacccg
agcaagctgaacggctatgtcgaagtggcaggccgtaaggcacaggtggtcatcgccaac
ccggcgggcatcagctgcgacggctgtggctttattaacgccaaccgcgccacgctgacc
accggcacgccgcagatggccaacggtgaactgcgtggttaccgcgtgggcaagggtgaa
atcgtggtggaaggcgctggcatggacagcagccgtcaggattacaccgacctgattgcc
cgcaccgtgaaggtcaatgccggtatctgggcaaaagatgtgaccgtcaccaccggtaaa
aacgaggtggccgccgataacaacacggtcacagccagcagcgcgacggacagcgacagc
agcgacgtcaaaccgacgctggcgatcgacgtcgcccagttgggcggcatgtatgccggt
aaaatccgcctggtggcgaccgagcaaggggtcggcgtcagcaacaaagggacgcttggc
agtcaggcgggtgacatcaccattaacgccaatggcgatatcgtcaacagcggtacggtc
aatgccggtcaggatctgctgctgggcggtaaaaaagttgacaacagcggcaccctgttt
gcccagcgcgatcagagcactaccgccagcgaggaggtgacgaataccggccttatcgcc
gccaaaggcaatacccgtgtgcgcagcgccagcatccgcaacagcaaaggcgcggccatt
gccgccgggatgaaaaccgatggcaccctggccgacagcggcaatctgacactcgccagc
gacggtaaactgaccagccagggtcaggcgctggccggtggcaatctgaacgccagcgcc
agccagattgatctcagtggcagcgataccgccgcgcatcacaccacgctgaccagcagc
agcgatatcatcaccgacgacgcacagctgctggcgagcggcgatttgaaactctccgcc
gccggtaaactcagcaacgatcgcggcgtgattaacgccaatgcgttgcaggtcagtacg
ccagttatcagtaaccgcggtggccagttactgcagagcggcgacagcgatctgcaactc
agcagcgacagcattgataaccagaatggccgcatcgccgccaatgccaaaaaattcagc
gtacagagcgccagcctgaataaccagggcggcaccattatggcggccggttccggctcg
ctgaatgttgcggccagcagtgaactgaataaccaaaacggtacgttggccgctgccagc
gatctggcgatcgccacgcctgtgctgaataacaatcagggacagatctccgccaataag
caattgacgctcgatcagcaaaacagcagcgccctcgcccgcaccgcagcaaccggcagc
gatctgcgtatcagcaatgaaggtggccgtctggtggcgggtcagcaactgaccttccgc
ggtcgcgagattaatggcagcggtgaaattctgtcgcttggcgatatggatctcagcttc
gcggacggcttcagcaacaacaataaaacgctggcaaatggcgatctgacactgaacgtc
aataacagcctgatcaacacggcgctgcttggcgcaggcggtaagctgaatgtgcaggcc
agcaacatcgacaaccagaccactggcgaactaagttcccaacagaccacgctgaacgcc
agcgatacgctgagcaaccgtggcctgatcgacggcgtgttgacccgcatcagcgccagc
accgtgaataatatcggcaccggccgtatttatggcgacggcctggcgatcggcgcagcg
acgctgaataatctggcggaaaataacagcagcgccaccatcgcggcgcgccagcgtctg
gatctgggcatcggtacgctgaataaccgcgaccactccctgatctacagcaatggtgat
atagccatcggcggcgcgctggatgcggacgcgctggcgaccggcaaggcaggcgaaatt
aacaaccacagttcgactatcgaatctgtgggcaatatggcgctgagcttcaccacgctg
aacaatatcaatgacaacttcgccaccagtatggtgcagttgtcccagcggcagaaagat
gagtacatggtggtggacctgaataatggcgtccactacagccctgacgactacaacatc
agcttctacaaaaatgaagtgcgccatatctgtatcgaaggcgtggtgtgtggtcgcgac
cattactatcagtacagctataccgagaccattagcgaagagcagatcgcccagagcgac
ccggcgaaaatcatcgcgggcggtcagatttcgctctccggcgataaactgctgaacgac
aagagccagattattgccggtggcaccctgctgatggcagtgagggaactggtgaatacc
gaagtcactggccagaaactgacggaaaaagtcggtcaggtcatcgaatgggatcgtatc
cataaaaaaggcaaagacagccagaaagcacgcgcttcggcctatacgccgccaacggaa
attcagtccatcagcctcagcccgaccgtgatgaaggagaatacccaggcgaccagcagc
gcaccatcgctggctgagtatgccgcgcagcgcgtggaagtggcaggacagaacactgac
gtcattcgttcgatgacaccggatgcttccctgccaaccggcagcctgttcacccccctg
ccggatgccaccagcagctatctgatcgaaaccgatccacgcttcaccaatcagagaatc
tggctgagctccgactatatgctgcgccagttgcagaccgatccgtcaatcacgcaaaaa
cgcctcggcgatggtttctatgaacaacgtctggtacgcgagcagatcgttgagctggtc
ggccagcgctatctcgccgactacaccagcgatgaagagcagtataagggcctgatggaa
gcgggcgtcagcttcgcgaagcaattcaatctggtgccgggcgtggcgctcaccgccgaa
cagatgaagcagatcactcaggatatggtgtggctggtggcgcaggatgtgaagatgcca
gatggcaccacccagaacgtgctggtaccgcaggtgtatgcacaggtgcagcaaggcgat
atggacggcagcggtgcgctgctggccggtaagaacgtcagcattggcgtcagcggcggc
atgctgaacagcggacgcatcagcgccacacaactggtcagcgtttccggcgacgatatc
gttaacgtcggcggcatcattgcaggtaaatccgtgtcgctgcaggcgaccaacgatctc
actaacaccggcggtacaatacgtgccaccgataccctgctggcgcaagccggacgcgat
atcaccgttgccagcgagaccaaccacgcggaaagtcagaacggcagtaaccgcttcagc
cgcgacaatatcgaccgtgtggcaggcatgtatgtgcagggtgacgatggcaaactcctg
ctgcaggcaggccgtgatgtcaatctgcaggccgcgcaggtggtcagctccggtgaaaac
agccagacgcagatcgcggctaatcgcgacatcactatgaccaccgtcaccaccggcagc
agcgacaaagtcgtgtgggataaagataaccacgtcacacagacgctgactcaggtacag
ggcagtgaagtcaccagcgacggcaatatctcgctgaatgccggcaataatattaacgcc
caggcggcaaaactgaatgccgaccggcagcttgcgctgaccgccaccaatgatatcaac
ctcggcagcgccagcagccaggaatatctggatatgaattccaaggtgaaaggttccggc
ttcctgtcgaaacgcaccactaccacccgcgccggctacgatgccacgctggcgaacggc
agcagtctgggcggggaaaatatctccatcagcgcgggtaacaatctgaatatcaccggc
agcgatgtggcggcagatcaggatctggcactgcgtaccggtaacgacctcaacgtcacg
gcggcggaagagagccgcgacagctggtcgatgaaaaaaaccaccaagtcgggcctgatg
agcagcggcggcattggcttctttgttggctcgatcaaagagagttcgacctccgatact
gcggcgctgacccacaacaacagcacgctgggcagcgtcaatggcgataccagtctggtg
gcgggcaataatatcgccgtgcagggctccgatgtgatcgccggtaacgacatcaatatg
gtggcgaacaatatcaccattgatgccgcgaataatcagagcaccaccgacaccacctat
gagcgtaaacagacgggtctgacgctggcgctgtccggcgcggtaggcagcgcgattaat
gccgcttacaccagcgcgaaagccgccgatgagcagcaggatggccgtatggcgtcactg
caaaagctgaaatcaggtctggcaggcgtacaggccgctcaggccgcggtactggcttcg
cagaataccgcggatcagaatgccattggcgtcagcctgtcgctgagcacctcaaagtcg
aagagcgagagccacagcgaagcggttaacgcttccggcagtaccgtgcaggcgggcaac
aatatcaatctggtggcgaccggttcagaaaatggcgcagatggcgatctgaccatcggc
ggcagccagctgaaagcgggcaacgatgtgctgctgtcggcgaaccgcgatatcaacctg
ctgtcggcgcagaatacccagttgcagaccggcaagaacagcagcagcggcggcggcgtg
ggcgtcagcatcggcgctggccaaggcggcgcggggatcagcgtatttgctaacgccagt
aaaggttccggcaacgaaaatggcgagggcctgacccacaccgaaaccactgtcgatgcc
gggaataagctgacggttaacagcggacgtgacaccaccctgcgcggcgcacagctgagt
gccgatcaggtggtagcgaatgtcggacgtgatctgacgctgcaaagcgaacaggacgtc
aataactatgattcgaagcagaagaacagctcggcaggcgccagctttacctttggcagc
atgaccggtagcgtcagcgccagcgtcgccaaagataagatccacagtacctataacagc
gtgcaggagcagaccggcatcttcgccggtgacggcggtttcgatatcaccgtcggcaat
cacacccagctggatggcgcagtgattggcagcactgccagcgaagataaaaaccgtctc
gataccggcacgctgggcttcagcaatatcgacaacagtgcagaatttgaagtatcgcac
agcagcgtcggtatcagcactggcgggctgggcgcacaggatctgctgaaaaatgccgta
cagaatctggcggctaatggtctgggagcgggtggcagcgatgggaatgcctctggcacc
acctatgccgccgtttcgccgggatcgctgattatccgtgaccaggcgaaccagcagcag
gatgtcagcacgctgagccgcgatgtcgagcatgcgaatcaaagtattagcccaatcttt
gataaggcgaaggaacagcagcgtctgagccagttgcggttgattagcgacgtggttaat
cagggcgtggatatcaccctgagccagggccagattatggcgaataacgcgggaattaaa
gcggctggtgagtgggatgagaccaaggagacacgtcaggaatactgggaccgtgtacaa
aataccgccgcgtataaggacatcaacgatcaatacaaagcgggtggcgagctgaataaa
ggtattcgtgccgcagcggccgccatcactgcgctggcgggtggtgatccactgaaagcg
ctggctcagggcgctgcgccctatctgtcaagcacggtgcgcgatttaaccctgcaaaat
agtgacaatccaaccgccgggcagatcgcggcaaatgccattggtcacgccatcgttggc
ggtgtggtggcagagctttctggttcaaacgccactgcgggtgcagtcggcgcagcgggg
ggtgaactggcggcacgcgctatcgtcgactatctctatccgggtaaaacagtggagtct
ctgagtgacgctgagcgagcgaaagtcagcaatctggcttctttggcggcaaccatggca
gcaggactggcaactgattcatccgcaggcgctgtggcgggacatgatgcaggtaaaaat
gccgttgattataacctgctgtccaataagtacggcgttgagaaactgagtaaagaaggc
cgtgcgctgtatgaaaaactaaaagccgcgggtatcggtggtatggatgaactgcaggaa
cgctttactgcctgtggctctaatggtaagtgccagactgatatccgcaatgagtaccgt
aaattagaaaaagaagcgggcgaaaaactggtcgcgatgtataaatctggggcaataacg
gctgatgagttcggctatctcgtaacagattatgccagaacgatgatgtatggtgcgcga
cagggccagctagattctgattactctggattcatcggtgacatctatacgcagacaggc
attgactggacaccaatgggcatcgctggcaatccgtatgtcgccgccattaagggcagt
gaacaacttgccgaatggaaagcacagggactgagcgatgagaaaatccgtgagctggca
ctgaaaaacgatatcattacctcagcgatgacgcctgttgatgtcaatgggatcctcagc
ttatacgataatggtgcatcggcgcaggaagttgtaaagtttgctgctggcatggcgttc
aacaaagtcgtacaaagaacacagtcaggcaacaaggggacgtcgggtaccattggtacg
cctgcgacgacagctaaaaatccgctaagtcccgttcagcaacgtgatgttcatggcaat
gaaattgtttatcggacaatgtcacctgagcaattcaggcagtttgaaagaacaggggtg
atgccagcgaccactgaaacatccgtttctccagtgctatcatactcttctaagtacgat
ggcataacagtgaaaatcactgttaaaccaggtactttctccgaactggaaaaaattggt
attgccgcaaacagtgctgccgctaaagaattacccaacatgtccacccaaacgggtaaa
tggatggaaacaaatactcgcttcaaggttgaaggaggacagatgacaacacaacttgga
caaggcaaaggaatggagatttttaataaaaacatcgtccattttgaacaggttaaataa
DBGET
integrated database retrieval system
