Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_028900
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Entry
PCC21_028900 CDS
T02320
Name
(GenBank) fatty oxidation complex, alpha subunit
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc00071
Fatty acid degradation
pcc00280
Valine, leucine and isoleucine degradation
pcc00310
Lysine degradation
pcc00362
Benzoate degradation
pcc00380
Tryptophan metabolism
pcc00410
beta-Alanine metabolism
pcc00640
Propanoate metabolism
pcc00650
Butanoate metabolism
pcc00907
Pinene, camphor and geraniol degradation
pcc00930
Caprolactam degradation
pcc01100
Metabolic pathways
pcc01110
Biosynthesis of secondary metabolites
pcc01120
Microbial metabolism in diverse environments
pcc01200
Carbon metabolism
pcc01212
Fatty acid metabolism
Module
pcc_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PCC21_028900
00650 Butanoate metabolism
PCC21_028900
09103 Lipid metabolism
00071 Fatty acid degradation
PCC21_028900
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PCC21_028900
00310 Lysine degradation
PCC21_028900
00380 Tryptophan metabolism
PCC21_028900
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PCC21_028900
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PCC21_028900
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PCC21_028900
00930 Caprolactam degradation
PCC21_028900
Enzymes [BR:
pcc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PCC21_028900
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PCC21_028900
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PCC21_028900
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AFR04293
LinkDB
All DBs
Position
complement(3256303..3258519)
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AA seq
738 aa
AA seq
DB search
MNDQQPFSVTTSSAIETTSSVTESPSAFSLTIRPDNIGVICIDVPGEKVNTLKSEFAEQI
LSVFEQARQHATLRGLIFISAKPDSFIAGADITMLNQCSSAEQAENLAKQGQETFDQVAA
LPFPVVAAIHGACLGGGLELALACDYRVCSLDEKTVLGLPEVQLGLLPGSGGTQRLPRLI
GLDSALDLILTGRHLRASQALRQGLVDEAVPHDILLETAVDILKKGKRKAVPLGWRSRLL
SSPGIRDVLFKIVKRKTRARTHGNYPATEKIIQVVRRGIEKGREEGYRHEARAFGKLVMT
PESAALRHLFFASNALKKTAGADSEAKPIHRVGILGGGLMGGGIASVTATRGQVPVRIKD
INEQGINHALKYNWQLLTKRVQSKRMKPTERQRLMTLISGSTDYRGFEHADIVIEAVFED
LALKRQMVAEIEEHAAPHTIFASNTSSLPIHQIAEGARRPQQVVGLHYFSPVDRMPLVEV
IPHAHTSAETVATTVALARKQGKTAIVVGDSAGFYVNRILAPYINEAAYCLLEGEPIESI
DYALVRFGFPVGPLALLDEVGIDVATKIVPVLSEELGKRFTSPPAFDAILKDGRKGRKNG
KGFYRYNKTRRFWQAGREVDSSIYPLLDVTAKAHIDPALISQRAVMMMLNEAARCLDEGV
IQCARDGDIGAVFGIGFPPFLGGPFHYMDRLGAETVVKTLLVLQQQYGDRFAPCERLLAM
REGRRTFYPPTDEDQSAS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcaacagcctttctccgtgacaacatcgtctgcaatcgaaacaacatcatct
gtgacggaaagcccctctgccttttccctaacgattcggccggacaatatcggtgtgatt
tgcattgatgttcccggcgagaaggtgaacacgctaaagagcgaatttgcagaacagatt
ctttcggtcttcgagcaggcgcggcagcatgcgacgctcagagggctgatttttatttcc
gccaagcctgattcgtttatcgccggtgcggatatcaccatgttgaaccagtgcagcagt
gccgaacaggcagaaaatctggcgaaacaagggcaggaaacgttcgatcaggtggccgcg
ctgccgttccccgtagtggccgcgatccacggtgcctgtctgggcggtgggctggagttg
gcattggcctgcgactatcgcgtctgctcgctggatgaaaaaacggtgctggggctaccg
gaagtgcagcttggcctgcttcccggctcaggcggaacgcagcggttgccacggttaatt
ggtctggatagcgcgctggatctcattctgaccggccgtcacctccgtgcgagtcaggcg
ttacgacaggggctggttgatgaggccgtcccgcacgatatcttgctggagacggcggtc
gacattctcaaaaaaggaaaacgcaaagctgtgccgctgggctggcgttcacgtttgctg
agtagcccaggtattcgcgatgtattgttcaaaatagtgaaacgcaaaacgcgagcgaga
acacacggtaactatccggccacggaaaaaatcattcaggtggtgcgtcggggcatagaa
aaaggtcgtgaggaagggtatcggcacgaggcgcgagcgtttggcaaactggtgatgacg
ccggaatcggcggcgctacgccatctgttctttgcctccaatgcattaaagaaaaccgcc
ggtgcggactctgaagcgaagccgatccaccgcgtcggtattctcggcggtgggttgatg
ggcggtgggatcgccagcgtgacggcgacgcgcgggcaggtaccggtgcgtattaaggat
atcaatgaacagggcattaaccatgcgctgaagtacaactggcaattgctgaccaaacgc
gttcagagtaagcggatgaagccgacggagcgccagcggttgatgacgttgatttccggt
agtacggactatcgcggttttgaacatgcggatatcgtcattgaggccgtttttgaagat
ctggcgctgaagcggcagatggtggcggagattgaagagcacgctgcgccgcacacgatt
tttgcatcgaatacttcctcgctgccgatccatcagattgcagagggcgcgcgccgtccg
caacaggttgtgggtctgcactactttagcccggtggacagaatgccgctggttgaggtg
attcctcacgcacacaccagcgcagagactgtggcgacgacggtggcgctggcgagaaag
caggggaaaaccgcgatcgtcgtaggcgacagcgctggtttttatgtgaaccgcatatta
gcgccttatatcaacgaagcggcttattgcctgctggaaggggagccgattgaatcgatc
gattatgcgctggtgcgctttggcttccctgttggtccgctggcgctgcttgatgaagtc
ggtattgatgtcgcgaccaaaattgtgccggtgctgagtgaagaactgggcaagcgcttc
acctctccgcctgcatttgatgcgatcctgaaagatggacgcaaagggcgcaagaatggg
aaaggattctatcgatacaataaaacgcgccgtttctggcaggcgggcagagaggtggat
agctcgatttatcctctgttggacgtcacggcgaaggctcatattgaccctgcgctcatc
agccagcgtgccgtgatgatgatgctgaacgaggccgcgcgttgtctggatgaaggcgtg
atccagtgtgcccgcgatggcgatatcggcgcggtatttggcattggcttcccgcctttc
ctcggcgggccgttccactatatggatcgtctgggagcggaaacggtcgtgaaaacgctg
ctggtgctgcaacaacagtatggcgatcggttcgcaccctgtgaacgtctgctcgcgatg
cgggaaggtcgacggacgttttatccgccaaccgatgaagaccagagcgctagttga
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