Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_029620
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Entry
PCC21_029620 CDS
T02320
Name
(GenBank) glycosyl transferase family 39
KO
K07264
4-amino-4-deoxy-L-arabinose transferase [EC:
2.4.2.43
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc00540
Lipopolysaccharide biosynthesis
pcc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PCC21_029620
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
PCC21_029620
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pcc01005
]
PCC21_029620
Enzymes [BR:
pcc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.43 lipid IVA 4-amino-4-deoxy-L-arabinosyltransferase
PCC21_029620
Lipopolysaccharide biosynthesis proteins [BR:
pcc01005
]
Lipid A
PCC21_029620
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_2
Parb-CE
Motif
Other DBs
NCBI-ProteinID:
AFR04365
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Position
complement(3328223..3329893)
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AA seq
556 aa
AA seq
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MEKGMIKLKSTVILVLFALLYLLPLNGRWLWSPDETRYAEISREMLQRGDWIVPHLLGIR
YFEKPVAGYWLNNISQWLLGHTNFSVRFASVLSTGLSALLVFWLAMLLWKNQRTALLAAT
IYLTSLLVYGIGTYSVLDPMVTLWMTAALFSHVLIQRATLTRERLMAWGLMGLACGMGFM
TKGFLALALPVISVLPVALAQKRIKELLLFGPLAIVVAVLISAPWALAVHAREADYWHYF
FWTEHIQRFAEDDAQHKAPFWYYLPVLMVGAFPWLALLPGALRSGWSERKANPERFLLLC
WMVMPLLFFSIAKGKLLTYILPCFAPLALLMAAWISGLAPAVRERVLRINSWLNIAFGSV
LALAVAALGLGIIVPHFYQPGEGLTIVSGVVCFIGWIAFAAVSLRIPRSWGYLVAGCPLF
LALLVGGSIPASVVDSKNPQTFIRSHQPLLEESRYVLSDEVGLAAGLAWELKRSDITLFK
ARGELNYGLDYADSTDRFVDEGAFPAWLAEKRRSGNVALVLKVDRDTDEEYRSLPVPDQL
KKSHRYMLLFYKQIAP
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggcatgataaagctgaaaagcaccgtgatactggtgttatttgctttgctc
tacctgttgccgcttaacggccgctggctgtggtcaccggacgaaacgcgctatgccgaa
atcagccgcgagatgcttcagcgtggcgattggattgtgccgcacttgctgggcattcgc
tattttgagaaacctgttgcaggctactggctgaataacatcagccagtggttattgggt
cataccaatttttccgtgcgctttgcctcggtgttgtctaccgggttgagcgcgctgctg
gtgttttggctggcgatgttgctgtggaaaaaccagcgtaccgcgctgctggcggcgacg
atctatctgacctcgctgctggtgtatggcatcggcacctacagcgtgctcgatcccatg
gtgacgctctggatgacggcggcgctgttcagccacgtgctgattcagcgcgccacgctg
acgcgcgaacggctgatggcctgggggctgatggggctggcctgcggcatggggtttatg
accaaaggctttctggcgctggccttgccggtcatcagcgtgctgccggtggcgctggcg
caaaagcgcattaaggaactgctgctgttcgggccgctggcgattgtcgtcgcggtattg
ataagtgcgccgtgggcgctggcggtgcatgcgcgagaagccgattactggcactacttc
ttttggactgagcatatccagcgttttgcagaagacgatgcgcagcataaagcgccgttc
tggtattacctgccggtgctgatggtcggcgcattcccctggctggcgctgctgccgggc
gcgttgcgcagcggctggagcgaacgaaaagcgaacccggaacggttcctcctgctgtgc
tggatggtgatgccgctgctgtttttcagcatcgctaaaggcaagctgctgacctacatt
ctgccgtgctttgcgccgctggcgctgctgatggcagcgtggatttccgggctggcccca
gcggtacgtgaacgtgtattgcgcatcaatagctggctcaacatcgccttcggcagcgta
ctggcgctcgccgttgccgcgctgggcctcggcatcatcgtgccgcatttctatcaaccg
ggagaagggctgaccattgtctcgggcgtcgtctgctttatcggctggattgcctttgcg
gctgtcagtctcaggataccgcgatcgtggggctatctggtggcgggttgtccgctattt
ctggcactgctcgttggcgggagtattccggcgagcgtggtcgattcaaagaaccctcaa
acctttattcgtagccatcagccgttgctggaggagagccgctatgtgctgagcgatgag
gttgggctggcagccggactggcgtgggaactcaaacgtagcgatatcaccttattcaag
gcgcggggcgaattgaactacgggctggactacgccgattccactgaccgctttgtggat
gagggcgcttttccggcctggcttgcggagaaacggcgtagcggaaatgtcgcgctggtg
ctgaaggtcgatagggataccgatgaggaataccgcagtctgcctgttcccgatcagctg
aaaaaatcgcaccgctacatgctgctgttttataagcagatagcgccatga
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