Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_031200
Help
Entry
PCC21_031200 CDS
T02320
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PCC21_031200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcc03400
]
PCC21_031200
Enzymes [BR:
pcc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PCC21_031200
DNA repair and recombination proteins [BR:
pcc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PCC21_031200
Prokaryotic type
PCC21_031200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFR04523
LinkDB
All DBs
Position
3528138..3528824
Genome browser
AA seq
228 aa
AA seq
DB search
MATSLTWHDVLAQEKQQPYFINTLEFVGKERAAGKTIYPPQKDVFNAFRFTELHQVKVVI
LGQDPYHGPNQAHGLSFSVRPGVPAPPSLGNIYKELASDIPGFEIPRHGFLQSWAEQGVL
LLNTVLTVEAGQAHSHANLGWETFTDRVIAALNEQREGLVFLLWGSHAQKKGNIIDQQRH
HILKSPHPSPLSAHRGFLGCKHFSQANQLLEQQGLSPIDWTPRLPEEA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctctctcacctggcatgacgtgctggcacaagaaaagcagcagccttacttc
attaacacccttgaattcgttgggaaagaacgcgcagcgggtaaaactatctatcctccg
cagaaggatgttttcaacgcgttccgctttaccgaactgcatcaggtcaaagtcgtcatt
ctgggacaagatccctatcacggcccaaatcaggcacacggactgtcgttctcggtacgt
cctggcgtacccgctccgccttctctgggcaatatttataaagaattagcgagcgacatc
cctggatttgaaattccacggcatggttttctacaaagctgggcggagcaaggcgtttta
ctgctcaacacggtattaaccgttgaagccggacaggcgcactcgcatgctaacttgggc
tgggaaacgtttactgaccgcgtcatcgcggcattgaatgagcagcgggaaggtctggtc
tttctgctatggggttcgcatgcacagaaaaaaggcaacatcattgatcagcagcgccac
catattctgaaatcgccgcacccttcccccctatctgcacaccgtggtttcttgggctgt
aaacatttttcgcaggctaaccagcttttggaacagcaagggctgtcgccaatagactgg
acgccaaggctcccggaagaggcttaa
DBGET
integrated database retrieval system
