Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_031750
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Entry
PCC21_031750 CDS
T02320
Name
(GenBank) membrane-bound lytic murein transglycosylase D
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcc01011
]
PCC21_031750
Enzymes [BR:
pcc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PCC21_031750
Peptidoglycan biosynthesis and degradation proteins [BR:
pcc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PCC21_031750
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM_RLK
LysM3_LYK4_5
NMB0315_dom_I
LysM_OapA
LysM1_NFP_LYK
TrkA_C
DUF3071
Motif
Other DBs
NCBI-ProteinID:
AFR04578
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Position
3586714..3587865
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AA seq
383 aa
AA seq
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MEVPENARIREQKMRYLKNKSYLHDVTLRAEPYMYWIVEQIKQRKMPMELVLLPIVESAF
DPSATSSANAAGLWQIIPGTGRNYGLKQNQWYDGRRDVIASTTAALDMMQRLNTMFDGDW
LLTVAAYNSGEGRVMQAMKANKAKGKSTSFWALALPRETSIYVPKMLALSDILKNSKKYG
VSLPQPNESRALAKVELGQQIELTQAAEMAGLSLNKLKSYNSGYKRNVTAPNGPHYIMVP
KAHVEQLKDSLADGDIAAIQPTRLAQTQPTPASQQYKVRSGDTLSAIAARLNVSTKDLQS
WNNLRSAGALKVGQTLQVAKASGNSSSITYQVRKGDSLASIAKRHGVNIADVMRWNTVIN
KNANIQPGDRLTLYVSSNIKPDS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggaggttccggaaaacgcccggatccgcgagcaaaaaatgcgttatttgaaaaataag
agctatctccacgatgtaacattacgggcagagccgtacatgtactggatagtcgagcag
attaagcaacgtaaaatgccgatggaactggtactgctacccatagtggagagcgctttt
gatccaagtgccacatcatccgccaatgccgctgggctatggcagattatccctggcaca
ggacgcaattatggtttgaaacaaaaccagtggtacgatggacgtcgcgatgtgattgcg
tctacgacggctgcgctggatatgatgcaacgactcaacacaatgtttgatggcgactgg
ttattgaccgttgctgcatacaacagtggtgaaggccgcgtcatgcaggcgatgaaagcg
aataaagcaaaaggaaaatcaaccagcttctgggcgctggcgttaccgcgggaaacgtca
atctatgttcctaagatgctggctttgagcgatattcttaaaaacagcaagaagtatggt
gtgagtctgccgcaacccaatgaaagccgcgcattagcaaaggttgagctggggcagcag
atagagttgacgcaagctgctgagatggctggtttgtcgttgaataagctgaagagctat
aactcgggctataaacgtaatgttaccgcgccaaatgggccacattacattatggttcct
aaagctcacgttgagcagttgaaagattcactggctgatggtgacatcgcagcgattcaa
ccaacacgcttagcgcaaacgcagccaacaccagcatcacagcagtataaggtacgctcg
ggtgataccttatcagccattgcggcacggcttaatgtcagcacgaaagatttgcagagc
tggaacaatctgcgtagcgctggtgcgctcaaggttggccagacgttgcaagttgccaaa
gcttcaggcaatagcagttctatcacctaccaggttagaaagggtgattcactggcaagc
attgctaaacggcacggcgtaaatatcgctgatgtgatgcgctggaatacggttatcaac
aagaatgccaacatccagccaggcgatcgtctgacgctttatgttagcagcaatataaaa
cctgattcttaa
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