Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_032190
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Entry
PCC21_032190 CDS
T02320
Name
(GenBank) YD repeat-containing protein
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
DUF4595
CarboxypepD_reg
SpaA
TEN_YD-shell
DUF4112
CarbopepD_reg_2
OCRE
Motif
Other DBs
NCBI-ProteinID:
AFR04622
LinkDB
All DBs
Position
complement(3636225..3641018)
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AA seq
1597 aa
AA seq
DB search
MSQDKQDSLLQSSAAAKKEFSTDKIIQGGCKECECETFVQYVYSSGDPVPNAPFVLTDSK
GNKTDGQTDENGYFKVQNMACSTYQLDIQEGSDDFDSPDTVENNPVLQANPAHAALAGEY
FTLYLLLHKKGIVEYDAEDSERYDEVNVDDSTWSGRFFSNVEDKYQLAYDRFQTLKKQIN
AGDREFKRAVNKIHHSLSAEVADQTTETAVLLLCQIILGFIPVVGQAPDVYFIGEWCWAA
YKKPDNLEDNYFLAEGALNIVGVIPGPGHALKIAGKSVVRAMKALEKSALDNQAVQLAVR
EIRNLSNGNIVRWLIDFAEKINKEAKEAIKLLNKIITAIELMVNNATNSAKSWIVAFAKD
SFSAICGVIKKLIGKFKEIIDAIIQKVNTFIGKIITRKSGTAVGKDKAAKPEIKVADKTP
SDVDGAPGHASSTASTADGKTCSTSNKCQGEGEPVDMATGYMVEWRTDFQLAGILPLAMK
RYYRSGGERKSGLLGSLWRSNWDMSLTLEDGVVTLTDGEFNQAIFVLPVEGECSRSPSNP
QWRLTRQQGRLILQDAGGLHYRFEHARGMELCLTSIEDSQDNQISLIWEFGVLRWVALPD
KRLIHVETRRQRITCLTLCDANRKPLKTLASYTYDSSGHLLSVRADEGHNFDYRYSLEGW
LLRWSDLASTWVEHDYDKKGRVIRDRTSEGYWPGHFEYDDDTLTSHYHSGFGGVISYVRD
ERNNILLKRTPDGGEIRFEWVDNQLVAETDPLGGRTAYQRNDWGLVTEVTLPDGATHQYE
YDDNGQLLAYIDPLGSEWRYQRNAAGQVIEVNDPEGREWLYRYGDTGQLSTVIGPDGVLQ
RYHYNRRGLLSSLERDNAPPVMFRYDDLDRLTERHIGHEAGVQVRRWEYDGVRESPSKVV
YEDGSETRFGYDVEGNLTAVTDALGQRYQFRYGAFDNLLEATDPLGATVRYHYNAEAEFA
GVTNSQGRDWTYGFDRSGRLSEERHYDGRVYRYQYDVADRLVQRTAPDGSTLHYEHDAAG
RITRITARKADGETDGITELAYDVAGRLTKAASPDAVVEYAYNRAGQVTSETVNGEAVQS
GYDAGGQRAVVEGILAPLQLAWQSGRLSSLGIGSHQPLQFSHTAAGEEQRRSNGSGFALR
HEWSPTGLLQRQALEGADGRVNDVLERRYQYDVLDRLTGISDSHWGEQAFRLNGAGQVTA
ERRDEGRRRQARLFGYDSEQNLCEVSQIAPGLGETLKVQDAVVQASARYDAAGRVVERGH
TQYRYDDCGRLAVKRETRPGFRPKETYFDWDVQDRLVRVSLPDGARWRYRYDAFGRRVSK
VREGQVPSAQAVARVAYRWDGDQLIGQQQYRADGSAAREVQWVYEPGSFRPLAQVEAQGD
STQLHYIVTDLTGTARELCSEEGEVRWRGEQGLWGAHREERRPIPLRRYLGDAANEEVYC
ELRYQGQLFDAETGLYYNRYRYFDPETAQYLSPDPLGIAGGIRPQAYVHNPLEWVDPLGL
TGSGCKGTSHLDNPKKKVNSAEVGDIVRTPSSHPEDFTRIRGGDYKNQNTGEIWSKSNTT
HSDKLGEWKVGIGKSAPTPSKKITVGMSDGKIIKIDK
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggataagcaggattcattgctccaaagtagtgccgcggcgaaaaaagagttt
tcaacggataaaatcattcaaggaggatgtaaagaatgtgagtgtgaaacctttgttcaa
tatgtctactcgtcaggggatcctgtaccaaatgctccttttgttttaaccgatagtaaa
gggaataaaacggatgggcaaacggatgaaaatgggtactttaaagtccaaaatatggcg
tgtagtacttatcaacttgatattcaggaaggttccgatgattttgattcccctgatacc
gtagaaaataacccggtacttcaagctaatcccgctcatgcagcattagcaggagagtat
tttaccctttatttactactgcataaaaaagggattgtagagtacgacgcggaggacagt
gaacgttatgatgaggttaatgttgatgatagtacatggagtggacgatttttttctaat
gtcgaagataaatatcaactagcctatgaccgttttcaaacgttaaaaaaacagattaat
gcaggggatcgtgaatttaagcgggcagttaataaaatccatcatagtttgtcggcagag
gttgccgatcagacaacagaaacagcggttttgctactttgtcaaattattctcggtttt
atccctgttgttggtcaggcccccgatgtttattttattggtgagtggtgttgggctgcc
tataaaaaaccagataacctggaggataactactttctggctgaaggtgcactgaatatc
gtaggtgtaattccaggtcctggacatgcgctaaagattgcaggtaaatctgttgtccgt
gcaatgaaagcattagagaaaagtgcattggataatcaggccgttcagctggctgttcgt
gaaattagaaatctatctaatggtaatattgtcagatggttaatagacttcgctgaaaaa
attaataaggaagctaaagaggctataaagctgctcaataaaatcattacggctattgaa
ctgatggtgaataacgccacaaattcagcaaaaagttggattgttgcatttgcaaaagat
agtttttctgcgatttgtggtgttattaaaaaattaattggcaaatttaaagagattatt
gatgcaattatccagaaagttaatacgtttattgggaaaattattaccagaaaatctgga
acagcggtaggtaaagataaggcggcaaaacctgaaattaaggtagcagataaaacaccg
tcagatgttgatggcgctcccggtcatgcgtcatctacggctagtacggcagatggaaag
acctgctctacatcaaataaatgccaaggtgaaggcgaaccggtcgatatggcgacagga
tatatggtggagtggcgtactgatttccaactagcgggtattttgccgctggcgatgaaa
cgctattaccggtctggtggtgagaggaaatcaggtttattaggatcgctatggcgcagt
aattgggatatgagcctgacacttgaggacggtgtggtgacactgactgacggtgagttc
aatcaggcgatatttgttttgcctgtcgagggggaatgttcccgttcaccatctaacccg
cagtggcgattgacccgccaacaagggcgattgattctgcaagatgcaggtggtttgcac
tatcggtttgagcacgccagagggatggaattatgtctaacatccatagaagatagtcag
gataaccagatctcgcttatttgggagtttggcgtattacgctgggtggctttgcctgac
aagcgcctgattcatgtggaaacccgtcgtcaacgtattacttgtttaacgttatgtgat
gctaatcgcaagcctttgaaaacactggctagctatacctatgacagtagcgggcattta
ctgagcgtgcgagcggatgaaggacacaactttgactatcgctactcgctggaaggctgg
ctgctgcgctggtcggatttagcgtcgacctgggttgagcatgattacgataaaaaaggc
cgtgtaatacgtgacagaacctcggaaggctactggccgggtcactttgaatacgacgat
gacaccctgaccagccattaccacagcggatttggcggggtgatcagctatgtgcgtgat
gagcgtaataatattctgttaaagcgtacacccgatggtggtgagatccggttcgaatgg
gtggacaaccaactggtggccgagactgacccgctggggggacgtacggcgtatcagcgt
aacgattgggggctggtgaccgaggttactctccctgacggtgcgacgcatcaatatgaa
tatgatgataacggacaactgctggcctacatcgacccgctgggcagcgaatggcgctac
cagcgtaatgcggccgggcaggttatcgaggtgaacgacccggaagggcgcgagtggctg
taccgttatggtgacacggggcaactgtcgacggtgataggcccggacggcgtgttgcag
cgttatcactataatcgtcgtgggctgctgagcagccttgaacgggataatgcaccaccg
gtcatgttccggtatgacgaccttgaccgcctgacggagcggcatatcgggcatgaagcg
ggcgtgcaggtgcggcgctgggagtatgacggtgtgcgcgagtcaccgtcgaaagtggtg
tacgaagacggtagcgagacacggtttggttacgatgtggagggtaacctgacggcggtg
acggatgcgctgggtcagcgctaccagttccgctacggggcgttcgataacctgctggaa
gcgacggacccgctgggagcgacggtacgctaccactacaatgcggaagcggagttcgcc
ggggtgacgaacagtcagggacgggactggacgtacggctttgaccgcagcggccggctg
agcgaggagcggcattacgacggtcgggtttaccgctatcagtatgatgtggcagaccgt
ctggtgcagcgcaccgcgccggatggcagcacgctgcactacgaacatgatgcggcaggg
cggataacgcgcatcacggcgcggaaagcggacggggaaacggacggtattaccgaactg
gcgtatgacgtggctggtcggctgaccaaagcggccagcccggatgcggtggtggaatac
gcctataaccgtgcggggcaggtgacgtcggaaacggtcaacggcgaggcggtgcagagc
ggttacgacgcgggtggtcagcgtgctgtcgtggaagggattctggccccgctgcagctg
gcgtggcagtcaggtcggctgtcgtcactgggtatcggttcacaccagccgctgcagttc
agccacacggcggcgggcgaagagcagcggcgcagtaacggcagcgggtttgcattacgc
cacgagtggagcccgacggggctgttgcagcgtcaggcgctggaaggggcggatggccgg
gtgaatgacgtgctggagcgtcgttatcagtacgatgtgctggaccggctgacgggcatc
agcgacagccactggggtgagcaggccttccggctgaacggggccggtcaggtgacggcg
gaacgccgtgatgaggggcggcggcgtcaggcgcggctgtttggttacgacagcgaacag
aacctgtgcgaggtgtcgcagatagcgccgggtctgggcgagacgctgaaggtgcaggat
gcggtggtgcaggcgtcggcgcggtacgatgcagcgggccgggtggtcgagcggggccat
acgcagtaccggtatgacgactgcgggcgtctggcggtgaagcgggaaacgcgcccgggg
ttcaggccgaaggaaacgtactttgactgggacgtgcaggaccgtctggtgcgggtgagt
ctgccggacggggcacgctggcgctatcgctacgatgcatttggccgcagagtcagtaag
gtacgcgagggacaggtgccgtctgcacaggcggtcgcacgggtggcgtaccggtgggac
ggtgaccagctgattggtcagcagcagtatcgggcggacgggtcagcggcacgggaagtg
cagtgggtatacgagccgggaagcttccggccgctggcacaggtggaagcgcagggcgac
agcacacaactgcactacatcgttacggacctgacaggaaccgcaagagagctgtgcagc
gaggaaggggaagtccgctggcgcggggagcagggactgtggggcgcacaccgcgaagag
cgacggcctatcccgctgcggcgctacctgggagatgcggcaaacgaagaggtgtactgt
gagctgcgctatcagggtcagttgtttgatgctgaaacgggattatattataatcggtac
cgttattttgatcctgagacagcgcagtatttgtcgcctgatcccctggggatcgctggg
ggaataaggccgcaagcctacgttcacaatccattagagtgggttgatcctctggggttg
actgggtcaggatgtaaaggtacaagccatttagataatccaaagaaaaaagttaattct
gctgaagttggcgatattgttcgaactccatcatcacatcctgaagattttacaagaata
agaggtggtgattataaaaatcaaaatacaggagaaatatggagcaagagcaataccact
cacagcgataagctcggagagtggaaggttggaatagggaaaagcgcacctactccgagt
aaaaagattacagtggggatgagtgatggaaaaatcattaaaattgacaagtag
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