Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_032530
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Entry
PCC21_032530 CDS
T02320
Name
(GenBank) SNF2 family helicase
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Adipokin_hormo
Motif
Other DBs
NCBI-ProteinID:
AFR04656
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Position
3688626..3691868
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AA seq
1080 aa
AA seq
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MLKRLLNKLTGNRQQIERHLKNQYQIEENGLNFQQSLVDDLELWALASWLEQLAEEDYLI
SLTDRWLLSWDALYRLLEDEEHASSLPLIGVPEILPLRASLSSRGALSDSDFRVWIAEWA
TLPARQPIRFSRTGAIFTHENQQHLLSRENWALLQATEQLSMQQTQAPGETTNQLGWAVI
RKCAKQAAAKFDDYLEKTHVIKPTSLSLRLRKATVADTAVIEIEPHFEDQPANWLGSFDK
NLQVHDSYRIPGENGELSHVIIPPEVKEVLNSIHSIPGRRVAGSEALSFVRNPYTFLGED
AASVIAPEEHEQALFDAHIFFHHFKLQPRVNDENKIEDIALVLEPISPVPQPEVSFLFSA
PWELDKFVQALGISVAAQMPAGSWQGYELELSQFTELQWHDCQSLLTRWQQEVEGKEFTD
VLDINKYGDRVIGIGEFEKISSRWLSKAQSEDWLPDDIDFSAFSVETLDGWQPDNLQHFD
ELQERITQAEAIGETHIISPWNDTELPLDAAKTFSRNWEKQKNTANESERNAVDKTVRAV
LKIEQNIEDVAYIKQRRDSLLNARHAEPEIPLSLKEHIRLKDHQREGVAWLQQLFLRSPQ
ETAGCLLADDMGLGKTLQILSFLVWFIEKFPDEPPSLIVAPVSLLDNWERELDNFFYTTG
IPVLKLYGETIKAVKYPKQAIPAHLQSQGIKNLLKPGWQSEAKIILTTYETLRDQEFSLA
RQHWSIMVCDEAQKIKNPAALITHAANAVQARFKVACTGTPVENTLVDLWSLFDFAQPGL
LGALNEFGKHYVRPIENEAGRDTGRLESLRALIEPQTLRRTKEEVARDLPQKIEVTSCKQ
LSFSGVQKQLYLSSIANWQQQQALSEGMQQSGVGMLGLLHRLKLICAHPAVVSPGPRYRE
GSPKLNWMLKTLDEIKHSSKDKVIIFTELRDLQREIQHAIQQRFGFRPVIINGDTSTKSQ
SQNSRQRLIDDFQDQPGFGVIILSTVAVGFGVNVQKANHVIHFTRCWNPAKEDQATDRAY
RIGQTKDVYVYYPTVRDGDITTFEETLDVLLNRRRALARDMLCTSPDLSGVDFEGVFKGA
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaacgtttgttaaacaaactgacgggaaaccgtcagcagatagaacgccacctg
aagaatcagtaccaaattgaggaaaacggactcaattttcagcaatcgctggttgatgac
ctggaactttgggctctggcatcctggcttgaacaactggctgaagaagactatctgata
tcactaacagaccgctggttgttgagttgggatgcattgtatcgtctattggaagacgag
gaacatgccagcagcctgcctttgattggcgtgcctgagattttgcccctacgtgcaagt
ttgagttcgcgaggagctctaagcgatagcgatttccgcgtctggattgctgaatgggct
acacttcccgcgcgtcaacctatccgctttagccgtaccggagctatttttactcatgaa
aatcagcagcatctgttgtcacgagaaaactgggcactcttgcaggcaaccgagcagctc
agcatgcagcaaactcaggctcccggcgaaaccaccaatcaactgggatgggctgtaatt
cgcaaatgtgcgaaacaggccgccgcaaaatttgatgattatttagaaaaaacgcatgtc
atcaaaccaacttcattgtcgttacgcctgcgtaaggcgacagttgctgatactgccgtt
atcgaaattgagccccacttcgaggaccagccagctaactggctcggtagttttgacaaa
aacttgcaggttcatgatagctaccgtatacccggagagaatggcgaactcagccatgtc
atcatccctcccgaagtgaaagaagtcctgaattcaatacactcaatcccaggccgtcgg
gtggccggtagtgaagcgctttcctttgttcgcaacccctataccttcctgggtgaagat
gccgccagtgttattgcccccgaagaacatgaacaggcactgtttgatgcccatattttc
ttccatcacttcaagcttcagcctcgcgtaaatgatgagaacaaaatagaggatattgcg
ttggttctggagccaatctcaccggtaccacaaccggaagtgtcattcctcttctctgcc
ccatgggagttggataaatttgttcaggctctgggtatcagcgttgccgcacaaatgcca
gcaggttcctggcagggttacgaactggaattgagccaattcaccgaactgcagtggcat
gattgccagtcactgctgacgcgctggcaacaggaagtcgaaggtaaagagttcaccgat
gttctggatatcaacaaatatggcgatcgcgttattggtatcggtgaatttgaaaaaata
tcatctcgctggctgagcaaagcgcaaagcgaagactggctccctgacgatatcgatttc
tccgcattttcggtcgaaacgctggatggctggcaacctgataacctgcagcatttcgat
gaactgcaggagagaatcacccaggcagaagctattggcgaaacgcatatcatctccccc
tggaatgatactgaattgccgctggatgcagctaaaacgttcagtaggaactgggaaaaa
cagaaaaatacagcaaatgaatctgagcgcaatgctgttgataaaacagtccgggctgtc
ctcaaaattgaacagaacattgaagatgtggcctacatcaaacagcgccgcgattcactc
ctcaatgcacgtcatgctgaacctgaaattcctctgagtctgaaagagcatatccgactc
aaagaccatcagcgtgaaggcgtggcctggcttcagcaacttttccttcgttcacctcag
gaaacggcaggctgcctgctggcggatgacatgggactagggaaaacgctgcaaattctg
agttttctggtctggttcattgaaaaattcccagacgaaccaccaagtctcattgtcgcc
ccggtctctcttttagataactgggaacgtgagctggataatttcttctacaccacaggt
attccggtattgaaattgtatggtgagaccattaaagcggtgaaatacccgaaacaagcc
attccagctcatctacagtctcaagggatcaagaatttactcaaacccggctggcagagt
gaggcgaaaattattctgacaacttacgaaacccttcgcgatcaggagttctcactggcg
cgtcagcattggtccattatggtgtgcgacgaagctcaaaaaataaaaaatccagcagca
ttaatcacccatgcagcgaatgccgtacaagccaggttcaaagtagcctgcaccggcaca
ccggtggaaaatacgcttgtagacctttggagcctatttgatttcgctcagccgggtcta
ttaggggcgctcaatgaatttggcaagcactatgttcgccctatagaaaatgaagcgggt
cgtgatacggggcgacttgaaagtttacgagcgttgattgaaccacaaacattacgccga
actaaagaagaggtagcgcgcgatctgccgcaaaaaatcgaagtcaccagctgtaagcaa
ctgtcgttttcaggagttcaaaagcaactgtatctttcctctattgccaactggcaacaa
caacaggcgctaagcgaaggaatgcagcagtcgggcgttgggatgttagggttgttacat
cgactcaaactcatttgcgcgcatccggcagtggttagcccggggcctcgctatcgggaa
ggctcgccaaaacttaactggatgctgaaaacgctggatgaaattaaacacagcagtaaa
gacaaggtgattatcttcactgagctgcgtgatctacagcgcgagatacagcatgcgatt
cagcagcggtttggcttccgcccggtgataattaatggtgataccagcactaaaagtcag
agccagaacagccgtcagcgattgattgatgatttccaggaccaacccggctttggcgtg
attattctttccacggtagcggttggttttggggttaacgttcagaaagccaaccacgtt
attcatttcacccgctgctggaacccggcaaaagaagatcaggcaactgatcgcgcctac
cgtatcggtcagacaaaagatgtgtatgtgtattacccgaccgtaagggacggcgatatt
acgacatttgaggaaactttagatgtgttgctcaaccgcaggcgtgcgcttgcaagagat
atgctttgcacttccccggatttaagcggggtagatttcgaaggtgtgttcaaaggagca
tga
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