Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_033350
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Entry
PCC21_033350 CDS
T02320
Name
(GenBank) tRNA/rRNA methyltransferase (SpoU)
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcc03009
]
PCC21_033350
03016 Transfer RNA biogenesis [BR:
pcc03016
]
PCC21_033350
Ribosome biogenesis [BR:
pcc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PCC21_033350
Transfer RNA biogenesis [BR:
pcc03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
PCC21_033350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
DUF6764
Motif
Other DBs
NCBI-ProteinID:
AFR04738
LinkDB
All DBs
Position
complement(3781482..3782633)
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AA seq
383 aa
AA seq
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MSDSFNSKSGKVRVMYVRSDDEGEKENKNKRPTDKDRRGDRRDGGGSRDQREKPKHPRDV
NPRYARENPSRDGDSNAKSPWGNKDRNERSGDRPRRPRGEETGGYESPWKTVSRAPGDNE
TPDHGGITGKSHIDPEQLRRQRQEETRVYGENACQALFKNRSEVIVRAWFLQEVTPRFRD
ALRWMAANRKAYHVVEEDELIKASGTEHHGGVCFLIKKRQGLDVREYLKTAGEHDCVLAL
EDVGNPHNLGGIMRSCAHFGVKGILVQDAALLESGAAVRTAEGGAEHVKAINADDFLSVL
TEFRNAGYTIVTTSSHKGTALSQAMLPAKTVIVLGQEGDGLSDSAWQQGDVKVSIGGTGK
VESLNISVATGILLSEWWRQNQA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattcattcaatagtaaaagcggcaaagtccgtgtgatgtacgtccgtagtgat
gatgagggcgagaaagagaataaaaacaagcgcccaactgacaaagatcgccgtggcgat
cggcgtgatggcggtggttctcgcgatcaacgcgaaaagccgaagcatccgcgcgacgtt
aacccgcgctatgcccgggaaaatccgtcccgtgacggcgatagcaatgcgaaatcgccg
tggggcaataaagatcgtaacgaacgtagcggcgatcgtccgcgtcgtccacgcggtgaa
gagacgggagggtatgaatccccgtggaaaaccgtgtctcgtgcgccgggcgataacgaa
acgccggaccatggcgggatcactggcaagagccatatcgatcctgagcagctgcgtcgc
cagcgtcaggaagaaacacgtgtctacggtgaaaatgcctgtcaggcgctgtttaaaaac
cgctctgaggtgatcgttcgtgcctggttcctgcaagaagtgacgccgcgtttccgcgat
gcactgcgctggatggcggcaaaccgcaaggcttaccacgttgtggaagaggacgagctg
attaaggcttccggcactgagcaccacggcggtgtctgcttcctgattaaaaagcgtcag
ggactggatgtgcgtgagtacctgaaaacggctggcgagcacgactgtgtgctggcgctg
gaagatgtgggtaacccgcacaacctcggcggcattatgcgcagctgcgcgcatttcggc
gtgaaaggtattctggtgcaggatgcggcgctgctggaatccggcgcggccgtgcgcacg
gcagaaggcggtgcggaacacgttaaagcgattaatgctgacgatttcctgtccgtgctg
acggagttccgtaacgcaggctataccatcgtgaccacctccagccataaaggcacggca
ttgtcgcaagcgatgcttccggcgaaaactgtgatcgtgctgggtcaggaaggcgatggt
ctgtcagatagcgcctggcaacagggggacgtaaaagtctctatcggcggtaccggtaaa
gttgaaagtctgaatatttcggtcgcaacgggcattttgctgtccgagtggtggcgacag
aatcaggcctga
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