Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_033490
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Entry
PCC21_033490 CDS
T02320
Name
(GenBank) lipoprotein NlpD
KO
K06194
lipoprotein NlpD
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
PCC21_033490
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M23
LysM
Motif
Other DBs
NCBI-ProteinID:
AFR04752
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Position
complement(3803462..3804496)
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AA seq
344 aa
AA seq
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MGSRMMNLRHIAACTVIVLGLAGCTNNNSKSAPISSVDGNTGNRGGMLSAPPSRISTAGE
SVATTSDGRIVYNRSYGNIPKGSYSGGNSYTVKRGDTLFYIAWITGNDYRDLAQRNNIPE
PYSLNVGQSLNLGSGSGNNASGGGLTSGGGMLATTDATRGGIPTPPSSAQIQTTSVDSQS
TNAYSGNQGKQNVGKMLPTTGAPTTAPVSAPAAVVSSNTAAVGSWRWPTDGKVIDSFSAS
EGGNKGIDIAGSRGQPITATASGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVR
EQQDVTAGQKIATMGSTGTSSVRLHFEIRYKGKSVNPLRFLPQR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgggaagccgaatgatgaatttgcgtcacattgctgcttgtacggtgattgtcttagga
ttggcgggatgtaccaacaataattccaaatccgcaccgatcagcagcgttgacggaaat
acgggcaaccgagggggaatgttatctgcgccaccatcacgcatttcaacggcgggtgaa
agcgttgcaacaacgtccgacggacgaattgtttacaaccgcagctacggcaatattccg
aaaggcagctacagcggcggcaattcctacacggttaaacggggcgataccctgttttat
atcgcgtggattaccggtaatgactaccgggatctggcgcaacgcaacaatattcctgag
ccatatagcctgaatgtggggcaatcactgaatttaggcagcggatctggcaacaacgct
tcgggcggtggcctgacgagcggtggtggtatgttggcaacaaccgatgccacccgaggt
ggtatacctacgccgccatcaagtgcgcaaatacaaactacatcggttgattctcagtca
actaatgcgtattctggtaatcagggtaaacagaatgtaggtaagatgttacctacgaca
ggggcaccaacaaccgctcctgtttccgcaccagcggctgttgtcagcagcaatacggct
gctgtcggcagttggcgttggcctaccgatgggaaagtcatagatagtttctccgcttcc
gaggggggaaataaagggattgatatcgccggctcacgtgggcaaccgatcaccgcaacc
gccagtgggcgcgtggtgtacgcgggtaatgcgctacgtggttacggaaatctgataatc
atcaaacataatgatgactacctcagtgcctatgcccataacgatacgatgctagtccgt
gagcaacaagacgtcacggcaggacaaaaaatcgctacgatgggcagtacgggcaccagc
tcagttcgcttgcactttgaaattcgttacaaggggaaatccgtaaacccgctgcgtttt
ctgccgcagcgataa
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