Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_034210
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Entry
PCC21_034210 CDS
T02320
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcc02000
]
PCC21_034210
Transporters [BR:
pcc02000
]
Other transporters
Pores ion channels [TC:
1
]
PCC21_034210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
AFR04824
LinkDB
All DBs
Position
complement(3892179..3896216)
Genome browser
AA seq
1345 aa
AA seq
DB search
MMDEKNEKKAQDLATEENASQDNAPVTPVRKGRWWKRVGIGFVAFLLLLVVGVGLLVGTT
PGLHLLLNTAARVVPGLDIASVSGGWRDLTLKNVSYQMPGVTVKSEEFHLSLALACLRKS
QLCINDLSANRIDVVVDTKALPVAAEPPAPSTPVTEISAPFPISLRQLTLSNVQVTVDDT
AVSLSEFRTGMQWEGRALTLLPTKISALLVALPKTPVDVLEDGKVTAAEMAAVIKETAAN
VRDAAEQGSSQTLHIDNALAANNTVAAATTTTPIPTASTPKTDSTSDKPAVPEQPLGERL
SELFSKPLLPDLPQFTLPLDLNIVEIHGEQLRLTGDQDILINNLFVQASTQQQHLRLDKL
IVQSPQGGLNVRGEATLSESWPVSLTANGVLNVDPIKGEKLKLTVEGGLREQLNVALNLS
GPQRAQLDLQTKLAEAGLPLALTLQTERVRWPLTGVTQYQADNVRLRFNGKATDYALSLR
GDLSGADIPPATLLLDGKGNEQQFTLSRLRLAALQGNADLTALIDWSKAISWRSELLLNG
INTAKQWPEWPAKVDGKITTRGSVYGGSWQLQVPELRLDGNVKANKLTARGELRGNAAGQ
WTIPALNLALGRNQLNVKGDLSDKWQLDADINAPSLDGMLPGLAGRAIGTLKLRGNLREP
QMLADITASGLRWQAMTISSVRVEGDVRSEQQIQGKLAVRLEALKQDGLNIALLTLDASG
NEKQHQLRLNMQGEPVAGQLALSGSFDRQEQRWRGTLNNTRFDTPVGEWRLTQDMALDYL
NAQQKITIGTHCWRNPNAELCVPKAIEAGPSGQASIRLNRFDLAMLKPFLTADTVLAGTF
TGGADISWQAGQGLPQAKVSLVGNGVSVRQQMQGNTLPIDFDTFTLNAGLDRGRAQLGWL
MAIRENGRFSGDIQVTDPQGRRNLGGSVTINNISLALLNPALSKGEKAAGILNANLRLAG
DAARPQIFGQMVLERLDIDGNWMPVDLTNGRLAVNFSGMSSTLQGFLKTDNGQLNLGGNA
DWSQPDAWRARIAAKGQKLRVTIPPMARLDVSPDIVFEATPQLFALNGSVSIPWARIVVK
DMPESAVAVSSDEVMLDAQRQPLKKASAAIPINSNLTIRVGNDVQLDAFGLAARLQGDLK
MVQDERGLGLNGQIDIPSGRFKAYGQDLIVRKGLILFSGPPDQPILNIEAIRNPDNTAND
VIAGVRVTGMAATPKLEVFSDPAMSQQEALSYLLRGQGLDSGGADSSAMTSMLVGLGVAQ
SGQVVGKIGEAFGVSNLALDTQGVGDNSQVVVSGYVLPGLQVKYGVGIFDSLATLTLRYR
LMPKLYLEAVSGISQALDVLYQFEF
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgagaaaaacgaaaaaaaagcccaggatctggctacagaagaaaacgcctcg
caggataatgcaccggtgacgccagtacgaaaagggcgctggtggaaaagggtcggcatt
gggtttgtcgccttcttactgctgcttgttgttggtgtgggattattggtaggaaccacg
ccgggtctgcatctgttgctgaataccgcagcacgcgtggtgccggggctggacattgcc
agcgtaagcggcggctggcgtgatttgacgctaaaaaatgttagctaccaaatgccgggc
gtgacggtaaagagcgaggagtttcatctgtcgcttgcgctagcgtgtctgcgcaaaagt
cagctgtgcatcaatgacctttcggcaaaccgcattgatgtggtcgtagataccaaagcc
ttgcctgtggcggcagagccaccggcaccttcaacgccagtcacggaaatctctgcaccg
ttcccgatttcactgcgtcagttaacgctcagcaacgttcaggttaccgtggatgacacg
gcggtttctctcagtgaattccgcactggcatgcagtgggaagggcgcgcgttgacgctg
ctgccgaccaaaatcagcgccctgctggtggccttaccgaaaacccctgtcgacgtgctg
gaagacggcaaagtgacggcggcggaaatggccgcggttattaaagaaacggcggcgaac
gtacgcgatgcggcggagcaaggctcctcgcaaacgcttcacatcgataacgcgttggcg
gcaaacaataccgtcgcggcagccaccaccacgacaccaataccgacggcatcgacaccc
aaaacggatagcacctctgacaagcctgccgtgcctgaacaaccgctaggtgaacgcctt
agcgaactgttctccaaaccgctattaccggatttaccccagttcacgctgccgttggat
ctgaatattgtcgagattcacggtgaacagctacggctgacgggcgatcaggacattttg
attaataacctgttcgtgcaggcctcgacccaacaacagcatttgcgtctggacaaactg
atcgtgcaatcgccgcagggcgggctgaatgtacgcggtgaagcgacgctcagcgagagc
tggcctgtctcgctgacggcgaacggcgtgctgaacgtcgatccgatcaaaggcgagaag
ctgaaactgacggttgagggcggcctgcgcgaacagttgaatgtggcgctgaacctctct
gggccgcagcgtgcccagttggatctgcaaaccaaactggcggaagccgggctgccgctg
gcgttgacgctgcaaaccgaacgcgtgcgctggccgctgacgggcgtaacgcagtatcaa
gctgataacgtcaggctgcgttttaacggcaaagcgaccgactatgcgctgtcgctgcgc
ggcgatctgagcggggcggatattccccccgcgacgctgctgctggatggcaaaggcaac
gaacagcagtttacgctaagccgcctgcggttggcggcattgcaggggaatgccgacctg
acggcgcttatcgactggagtaaagcgataagctggcgcagcgagctactgctgaacggg
attaataccgcgaaacagtggcctgaatggccggctaaagtagacggcaagattacgaca
cgcggtagcgtctatggcggtagctggcagttgcaggtgccggaactgcgtctggacggc
aacgtgaaagcgaataagctcacggccagaggtgaactgcgcggtaacgcggcgggccag
tggacaattccagcgctgaatctggcgttaggccgcaaccaactgaacgtcaaaggcgac
ctgagcgacaagtggcagttggatgcagacatcaatgcgccgtccttggacggcatgttg
cccggtctggcggggcgtgccatcggcacactcaaactccgtggcaatctgcgtgaacca
cagatgctggcagatatcacggcgtccggcctgcgctggcaggcgatgacgattagcagc
gtgagggtggaaggcgatgtgcgctctgagcagcagattcagggcaagctggccgtgcgt
cttgaagcgctaaagcaggacggcctgaatattgcgctgttgacgctggatgccagcggc
aacgaaaagcagcaccagcttcgcctgaatatgcagggcgaaccggtcgcggggcaactg
gcactttcgggcagctttgatcgtcaggaacagcgctggcgcggcacgctgaacaatacc
cgcttcgatacgccagtgggtgaatggcgtctgacgcaggatatggcgctggattacctg
aatgcgcagcagaagatcaccatcggcacgcactgctggcggaatccgaatgcagagctt
tgtgttccaaaagcgattgaggccggaccgagcggacaggcgagtattcgactgaaccgc
ttcgatctcgccatgctgaaaccgttcctgacggcggataccgtgctggccgggacgttc
accggcggtgccgatatcagctggcaggcggggcaaggtttaccgcaggcgaaagtgtcg
ctagtgggtaacggcgtcagcgttcgtcagcagatgcagggcaacacgctgccgattgat
ttcgatacctttacgctgaatgccgggctcgatcgcgggcgggcgcagcttggctggctg
atggcgattcgcgagaacgggcgcttcagcggtgatattcaggtaaccgatccacaaggg
cggcgcaatctcggcggcagcgtcacgatcaacaatatttcgctggcgttgctcaaccct
gcgttgagtaaaggagaaaaagcagcggggattctgaatgcgaacctgcgtctggcgggg
gatgcggcacgtcctcagatctttggccagatggtgctggagcggttggatattgacggc
aactggatgccggttgatctgaccaacgggcggctggcggtgaatttcagtgggatgtca
tcaacgctgcaaggcttcctgaaaacggataacgggcagttgaaccttggcgggaatgct
gactggtcgcagcctgatgcctggcgtgcgcggattgcggcgaaaggccagaagctacgg
gtgacgattccgccgatggcgcggctggatgtttcgccggatattgtcttcgaggccacg
ccgcagctgttcgcgttaaacgggtcggtcagtattccgtgggcgcgcatcgtggttaaa
gacatgccggaaagtgcggtggcggtgtcatcggatgaagtgatgctggatgcacagcgc
cagccgctgaagaaagccagcgcagcgattccaattaacagcaacctgacgatccgcgtc
gggaatgatgtacagctggatgcgttcgggctggcggctcgcctacagggcgatctgaaa
atggttcaggacgagcgcggattagggctgaacggccagatcgacattccatctggccgc
tttaaagcctacgggcaggatctgattgtccgcaaagggctgattctgttctctggcccg
ccggatcagccgatcctgaatatcgaagccattcgtaacccagacaacacggcgaatgac
gtcattgccggcgtgcgcgttactggcatggccgcgacaccgaagctggaagtcttctcc
gatccggcgatgtcgcagcaggaagcgctctcttatctgctgcgcgggcagggtttggac
agcggtggagcagatagctcggcaatgacctcaatgttagtcggtttaggggttgcacaa
agtggtcaagttgtgggtaaaatcggcgaggcctttggcgtaagtaatttagctctggat
acacagggtgttggcgataattctcaggttgtcgtcagcggctacgtccttccgggtctg
caagtgaaatatggtgttggcatattcgattctttggcaacgttaacgctacgttatcgc
ctgatgccaaaactatacttggaagcggtgtctggaattagccaggcattagatgtgctc
tatcagtttgagttctag
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