Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_035850
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Entry
PCC21_035850 CDS
T02320
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc00470
D-Amino acid metabolism
pcc00550
Peptidoglycan biosynthesis
pcc01100
Metabolic pathways
pcc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PCC21_035850
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PCC21_035850
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PCC21_035850
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcc01011
]
PCC21_035850
Enzymes [BR:
pcc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PCC21_035850
Peptidoglycan biosynthesis and degradation proteins [BR:
pcc01011
]
Precursor biosynthesis
Amino acid ligase
PCC21_035850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
TTL
ATP-grasp
ATPgrasp_ST
ATP-grasp_3
ATPgrasp_YheCD
RimK
Motif
Other DBs
NCBI-ProteinID:
AFR04988
LinkDB
All DBs
Position
complement(4075533..4076453)
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AA seq
306 aa
AA seq
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MTEKVAVLLGGTSAEREVSLLSGQAVLAGLKEAGINAHAVDTRDVSVTTLKEEGFTKIFI
ALHGRGGEDGTLQGVLEFLGLPYTGSGVMASALTMDKLRTKQVWQAVGLPVSPYVALDRR
QYSETAANALLAKFTHLGLPLIVKPSREGSSVGMSKVNTLSELPAALEEAFRHDDDILIE
KWLSGPEYTVAILGDDVLPSIRIQPAGTFYDYEAKYLSDDTQYFCPSGLPDDQEQALAGL
AMAAYRAVGCSGWGRVDFMLDSDGAFYLLEVNTSPGMTSHSLVPMAARQRGLTFSQLVVK
ILELAG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaaagttgctgtattgcttggtggaacctctgccgaacgtgaagtgtcgtta
ctttccggtcaggcggttttggctggcctgaaagaagcgggcatcaacgcgcatgcggtt
gatacccgtgacgtctctgtgacgacgttaaaggaagaaggctttaccaagattttcatc
gccttacatggtcgtggtggcgaagatggtacattgcagggcgttctggagttcctgggg
ctgccttataccggtagcggcgtcatggcatctgcactgacgatggataaactccgcacc
aaacaggtgtggcaagccgtgggattaccggtgtcgccctacgtggcgctggatcgtcgc
caatattcagaaacggcggcaaacgcgctgctggcgaaattcacccatctcgggctgccg
ctgatcgtcaagccaagccgtgaaggttccagcgtggggatgagcaaagtgaatacgctg
agcgaactgcctgctgcactggaagaagcattccgtcatgatgacgatattctgatcgag
aagtggctgagcggcccagagtatacggtggctatcctgggtgatgacgtgttgccttct
attcgtattcagcctgcgggtacgttttacgattatgaagcgaagtatttatcggatgat
acgcagtatttctgtccgagtggtttgccggacgatcaagagcaggcgctagcgggcctg
gcgatggcggcttatcgtgcggtgggctgtagcggatggggacgcgtcgattttatgctg
gatagcgacggtgccttctatctgcttgaagtgaatacgtctccggggatgacgagccac
agtctggttcctatggcagcgcgccaacgtgggctgactttctcgcaactggtcgtgaaa
attttagagctcgctggctga
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