Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_036270
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Entry
PCC21_036270 CDS
T02320
Name
(GenBank) ATP-dependent helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcc03021
]
PCC21_036270
Transcription machinery [BR:
pcc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PCC21_036270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AFR05030
LinkDB
All DBs
Position
4125813..4128716
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AA seq
967 aa
AA seq
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MPFTLGQRWISDTESELGLGTVVAVDTRMITLLFPASGENRLYSRSDAPITRVMFNPGDT
VTSHEGWQLKVDDVREEKGLLVYCGQRLDDETSAELREVFLDSKLTFNKPQDRLFAGQID
RMDRFALRYRARKHQNEQALQQQVGLRGMRASLIPHQLHIAHEVGQRHAPRVLLADEVGL
GKTIEAGMIIHQQLLAGRASRVLIVVPETLQHQWLVEMLRRFNLLFSLFDDERYAEAKLD
SSNPFETEQLVICSLGFVQRSAQRFAQLVNADWDLLVVDEAHHLVWSEESPSPEYQAIET
LARATPAVLLLTATPEQLGQQSHFARLRLLDPNRFHDYQEFVAEQQQYRPVADAVTLLLA
GEKAQTAELNALSDLLGEQDIEPLLKAINSDSDDNQKARQELITMLMDRHGTSRVLFRNT
RQGVKGFPQRILHQIRLPLPAQYQTAIKVSGIMNANKALEVRARDMLYPEQIYQQLEGDD
ATWWNFDPRVEWLLNYLTAHRDEKVLVICAQAATALQLEQVLRTREAIRAAVFHEGLSIL
ERDRAAAYFASEEEGAQVLICSEIGSEGRNFQFASHLVMFDLPFNPDLLEQRIGRLDRIG
QAKEIQILVPYLESTAQALLVRWYHEGLDAFEHTCPTGRTIYDAHHTQLIERLTTVGEQQ
GLDEFIHVCRQQHDSLKQQLEQGRDRLLEMHSNGGEQAQQLAQAIAEQDNDVNLVTFALN
LFDIVGINQEDRSDNLIILTPSDHMLVPDFPGLPQDGCTITFDRDQALSREDAQFISWEH
PLIRNGLDLVLSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTPV
RLLMDRKGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQPDVHAMLQQAEALVETQARQ
LIAEAQEQADLQLRRELERLEALKAVNPNIREDELTALENQREQVLSNLHEANWRLDAIR
LVVVTHQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcagcgctggatcagcgatacggaaagcgaacttggactggga
acggttgttgccgtcgatacgcgtatgattacgctgcttttccctgccagcggtgaaaac
cgactttattcccgcagcgacgcccccatcacccgcgtgatgttcaatcctggcgacacc
gtcaccagccatgaaggctggcagctcaaagttgatgacgtgcgagaagaaaaagggttg
ctggtgtattgcggccaacgactggacgatgaaacgtcggcggaactgcgtgaagtcttc
ctcgacagcaaactgacgttcaacaaaccgcaagatcgcctgtttgccgggcagatcgat
cgtatggatcgctttgccctgcgctaccgcgcccgcaagcatcagaacgaacaggcgcta
cagcagcaggtcggattgcgcggcatgcgtgccagccttatcccccatcagttgcatatc
gctcatgaagtcggccaacgccacgcaccgcgcgttttgctggcggacgaagtcggtctg
gggaaaaccattgaagccgggatgatcatccaccagcagttgctggcaggtcgtgccagt
cgcgtgctgattgtcgtgccggaaaccttgcaacatcagtggctggtcgaaatgttgcgc
cgctttaacctgctgttctcactgtttgacgacgagcgctatgccgaagccaagctggac
agcagtaacccgtttgaaaccgaacagttggtcatctgctcactgggatttgtgcaacgc
agcgcccagcgctttgcgcagctcgtcaacgccgactgggatctgctggtggtggatgaa
gcccaccatctggtctggagcgaagaaagccctagcccggaatatcaggccattgaaacg
ctggcacgcgccacgccggccgttctgctcttaaccgcgacgccggaacagctcggccaa
cagagccactttgcgcgcttacgcctgctcgatcccaaccgtttccacgactatcaggaa
ttcgttgccgaacagcagcagtaccgcccggttgccgatgccgtcacgctgttgttagcg
ggcgaaaaagcccaaacggctgaactgaatgcgctgagcgatctgctgggcgaacaggat
atcgaaccgctgttgaaagccatcaacagcgacagcgatgacaatcagaaagcacgtcag
gaactgatcaccatgctgatggatcgccacggtaccagtcgtgtgctgttccgtaacacg
cgtcagggggttaaaggcttcccgcagcgtatcctgcatcaaatccgcctgccgctgccg
gcgcagtaccaaacggcgattaaagtgtccggcattatgaacgcgaataaagcgctggaa
gtccgcgcccgcgacatgctgtacccggaacaaatttatcagcagctcgaaggggacgat
gccacgtggtggaacttcgatccgcgcgtggaatggttactgaactacctgactgcacat
cgtgatgaaaaagtgctggtgatctgtgcacaggccgccaccgcgctacagctggagcaa
gtgctgcgcacgcgtgaagcgatccgcgccgccgtcttccatgaagggctgtcgattctg
gagcgtgaccgcgccgccgcctattttgcttctgaagaagaaggcgcacaggtgctgatc
tgttcagagatcggttccgaaggtcgtaacttccagttcgccagccatttagtgatgttc
gatctgccgttcaaccccgacctgctggaacagcgtattggtcgtctggaccgtatcggg
caggccaaagaaattcagattctggtgccctatctggaaagcacagcacaggcattactg
gtgcgctggtatcacgaagggctggacgcatttgagcacacctgtccgacaggccgtacc
atctatgatgcgcaccacacgcagttgatcgagcgactgacgaccgttggtgaacaacag
ggactggatgagtttatccatgtttgccgtcaacagcacgacagcctgaaacaacagctt
gaacaaggtcgcgatcgcctgttggaaatgcattctaacggtggcgaacaggctcaacag
ctagcgcaagccattgccgagcaggataatgacgtcaatctggtgacattcgccctgaac
ctgttcgatattgttggcatcaatcaggaagatcgcagcgataacctgatcatcctgacg
ccatccgatcatatgctggtgccagacttcccgggcctgccgcaggacggctgtacgatc
accttcgatcgcgatcaggcgctctctcgcgaagatgcacagtttatcagttgggaacac
ccgctgatccgtaacggactcgatctggtgctgtccggcgataccggaagctgcgcagtg
tcgctgctgaaaaataaagcgctgccggtcggcacattgctggcagaattggtttacgtg
gtggaagcgcaggcaccgaaacacctgcaactgactcgcttcctgccgcctacgccggtt
cgcctgctgatggaccgtaaaggcaccaatctggcggcacaggttgagtttgaaagcttc
aaccgccagctcaatgcggtaaaccgccatacgtccagcaagctggtgaatgccgtacag
cctgatgttcacgcaatgctgcaacaggcagaagcgctggtggaaacgcaggcgcgccag
ctcatcgccgaagctcaggagcaggctgacctgcaattgcgccgcgagctggaacgtctg
gaagcgctgaaagccgtcaaccccaacattcgtgaagatgagctgactgcactggaaaac
cagcgcgagcaggtgctgagcaacctgcatgaggccaactggcgtctggatgcgatccgt
ctggtcgtggtgacgcatcagtaa
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