Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_036520
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Entry
PCC21_036520 CDS
T02320
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcc03000
]
PCC21_036520
Transcription factors [BR:
pcc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PCC21_036520
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
RhopH3_C
Motif
Other DBs
NCBI-ProteinID:
AFR05055
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Position
complement(4155104..4156018)
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AA seq
304 aa
AA seq
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MSHLNFNHLYYFWQVYKSGSVAGAAETLFLTPQTITGQIKCLEERLQGKLFKRKGRGLEP
TELGQLVFRYADSMFQLSQEMLDIVNYRKESNLLFDVGVADALSKRLVSRVLETVVTEQE
HIHLRCFESTHEMLLEQLSQHKLDMILSDCPVDSTQQEGLFSIKLGECGVSFYCKRPQPE
QPFPACLEQRKLLIPGRRTMLGRKLLNWFTAQNIQTTILGEFDDAALMTAFGINNDAIFV
APSLYANEIYQQGDIVEIGRIENIQDEYYAIFAARMIQHPAVQRVCNADFSALFCDTTDT
KKPA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcatttaaattttaatcatctctattatttctggcaggtttataagtcgggatcc
gttgcgggggcagcagagacgctgttcttaacgccgcagaccattactggacaaatcaaa
tgcctggaagagcgtttacagggcaagctcttcaagcgtaagggacgagggttggaaccg
acggagctgggacagcttgtttttcgctatgcggatagcatgttccagcttagccaggaa
atgttggatattgtgaactaccgcaaagaatcgaacctgttattcgatgtcggcgtggct
gatgcgctgtccaaacggctggtgagcagggtgctggaaacggtcgtaacggaacaggaa
catatccatttacgctgttttgagtcgacgcacgaaatgctgctggagcagttgagccag
cataagctggatatgattctgtcagattgtccggtggattcgacgcagcaggaagggctg
ttttcaatcaagctgggcgaatgtggtgtgagtttttattgtaaacgtccgcagcctgag
cagccttttcccgcctgccttgaacaacgtaagctgctgattcctgggcggcgaaccatg
ctgggacggaaactgctgaactggtttacggcgcaaaatattcagacgactattttgggc
gaatttgatgatgcggcgctgatgaccgcattcggcattaataacgacgcgattttcgtt
gcaccgtcgctgtatgccaatgaaatctaccagcagggcgatatcgttgagatcggtagg
atcgagaacattcaggatgagtattatgcgatttttgcggccagaatgatccaacatccg
gcggtgcagcgcgtctgtaacgcggatttttcagcgctcttctgtgataccacagacaca
aaaaaaccggcctag
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