Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_038960
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Entry
PCC21_038960 CDS
T02320
Name
(GenBank) Orn/DAP/Arg decarboxylase 2
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc00300
Lysine biosynthesis
pcc00470
D-Amino acid metabolism
pcc01100
Metabolic pathways
pcc01110
Biosynthesis of secondary metabolites
pcc01120
Microbial metabolism in diverse environments
pcc01230
Biosynthesis of amino acids
Module
pcc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PCC21_038960
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PCC21_038960
Enzymes [BR:
pcc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PCC21_038960
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AFR05299
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All DBs
Position
complement(4405933..4407336)
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AA seq
467 aa
AA seq
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MSNLFSFAAVSSLPVAQAHWPERLTPYLDSEIEQFLFNSPQRLSWLVEQYGSPLNIVWPH
TVANNIAALRTVLQRHDVDCRLYYGAKVNKSPGLVQAAVNAGVGVDVSSLQELKDALRAG
CDGARLCATGPAKTREFLTALVHHRALIVLDSPEEFDEVLALADLLRVTEPVRVLLRYRP
SFAQASRFGMLADEVAICLEALSTRQAVLHLEGFHFHLGGYDPDTRVAAFAEVLPLLERA
RSKGLLPVIIDIGGGLPIQYLSASRYQDYLAKQNAADYRHGQVPTSFYPYGGERSAVDYL
EAFLSASIGQDRVADVLKQHGLILAIEPGRSLADQSAITVFRVTRTRRQPDGNHVVFVEG
SSFSACETWFNSEFLIDPLHVFSVKKDTPLAPGKAWIAGHSCLDDDVITNRLIHFRTVPQ
SGDLLIYANTAGYQMDLLENAFHRHPLPARLCAFKGKKGELIFSSDN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacctgtttagctttgccgcagtgtcttccctccctgtcgcgcaggcccactgg
cctgagagactgacgccttatctggatagtgagattgagcagtttcttttcaactcgccg
caaaggctgtcgtggctggttgagcagtatgggtcgccgctgaatattgtctggccgcac
actgtggccaacaatatcgcggcattgcggacagtgttgcagcgtcacgacgtggactgc
cgcctgtactacggcgcgaaggtgaacaaatcgccggggctggttcaggcggcggttaac
gcgggcgttggcgtggatgtttccagcttacaggaactgaaagatgcgctgcgggcaggc
tgcgacggcgcgcggctgtgcgccaccggcccggccaaaacgcgtgagttcctgacggcg
ctggttcatcaccgcgctcttatcgtgctggattcaccggaagagttcgacgaggtgctc
gcgctggcggatttactacgcgtgacggagcccgtgcgggttctgctgcgctatcgcccg
tcgttcgcgcaggccagtcggtttggcatgctggccgatgaggttgcaatctgtctggag
gcgttgagcaccagacaggctgtgcttcatctggaaggcttccatttccatctcggcggc
tatgatcccgatacccgcgtggcggcattcgctgaggtcctgccattactggagcgggca
cgctcaaaggggttgctgcccgtgattattgatatcggcgggggattgccgattcaatat
ctttcggcttcacgctatcaggattatttagcgaagcagaatgcggcggattaccgccac
ggtcaggtgccgacctcgttttacccatatggcggcgagcgttcggctgtcgactatctt
gaggcattcctgtccgcctcaatcggacaggatcgcgtagcggacgtgctcaagcagcac
ggcctgattctggcgatagagccgggacgaagcctcgctgaccaaagtgcgattaccgtg
tttcgcgtcacgcgcacgcgccgccagccggatggcaaccacgtcgtgtttgtggaaggc
agcagcttcagcgcgtgtgaaacctggtttaactctgagtttttgattgatcctctgcat
gttttttccgtcaaaaaagacacgcctctggctccgggcaaagcctggatcgccggacat
agctgtctggacgacgatgtcattacgaaccgattgattcattttcgaaccgtgccgcag
tcaggcgatttactgatttacgcgaatacggcgggataccagatggacctgctggaaaac
gcgtttcatcggcatccgctgcctgcgcgcctgtgtgcgttcaaaggtaagaaaggtgag
ctgattttttccagtgataactga
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