Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_039050
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Entry
PCC21_039050 CDS
T02320
Name
(GenBank) RNA binding S1 domain protein
KO
K06959
protein Tex
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
PCC21_039050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
S1_RRP5
YqgF
Motif
Other DBs
NCBI-ProteinID:
AFR05308
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Position
4418856..4421189
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AA seq
777 aa
AA seq
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MNDSLSHIIASELQARTEQVDAAVRLLDEGNTVPFIARYRKEVTGGLDDTQLRQLETRLG
YLRELEDRRQTILKSIDEQGKLTPQLATAINGTLSKTELEDLYLPYKPKRRTRGQIAIEA
GLEPLADGLWQDPSQEPELTAQAYVDAEKGVADVKAALDGARYILMERFAEDATLLAKVR
NYLWKNAHLVSRVVEGKEEEGAKFRDYFDHHEPIAQVPSHRALAMFRGRNEGVLQLALNA
DPQHEEAPRESYCEQIIIDHLNLRLGNAAADSWRRAVISWTWRIKVLLHLETELMGSVRE
KAEDEAINVFARNMHDLLMAAPAGMRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT
GQAAKAAPIIAALCLKHQVELVAIGNGTASRETERFFLDTQKQFPDIKAQKVIVSEAGAS
VYSASELAALEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSLLAK
KLDAVVEDCVNAVGVDLNTASVALLTRVAGLTRMMAQNIVTWRDENGRFHNREQLLKVSR
LGPKAFEQCAGFLRINNGNNPLDASTVHPEAYPIVERILAATEQALQELMGNPNALRNLK
PSDFTDERFGVPTVTDIIKELEKPGRDPRPEFKTASFADGVETLNDLLPGMILEGAVTNV
TNFGAFVDIGVHQDGLVHISSLADHFVDDPHKVVKAGDIVKVKVMEVDLQRKRIALTMRL
DEQPGDTASRRGGGNARGDSNTSSRQPAGKSRPRPASAPVAGNSAMGDALAAAFKKR
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattcattaagccacattatcgccagcgaattgcaggcgcgtacggagcaggta
gacgccgccgtccgcctgctggacgaaggaaacaccgtcccttttatcgcccgttaccgt
aaagaagtgaccggcgggctggatgacacccagttgcgccagctcgaaacgcgcctcggt
tacctgcgtgaactggaagaccgacgtcagactattctgaaatccatcgacgaacagggg
aaattaaccccgcagctcgccaccgccattaacggcacgctgagcaaaaccgagctggaa
gatctctatctaccgtataaaccgaagcgccgcacgcgtgggcagatcgcgattgaagcc
ggtctggaaccactagccgacggcctgtggcaagatccgagtcaggagccggagctgacg
gcacaggcttatgtcgatgccgagaaaggcgtagcggacgtgaaagccgcattggacggc
gcacgttacatcctgatggaacgctttgccgaagacgccacgctgttggcaaaagtgcgt
aattacctgtggaaaaacgcccatctggtttcccgcgtcgtggaagggaaagaggaagaa
ggcgcgaagttccgcgattatttcgatcaccatgaaccgattgctcaggtgccttcacac
cgcgcactggccatgttccgtggccgtaacgaaggcgtgctgcagctggcactgaacgcc
gatccgcaacatgaagaagcgccgcgtgagagctactgcgaacagattattatcgatcac
ctgaacctgcgtttggggaatgcggcagcggacagctggcgacgcgccgtcattagctgg
acgtggcgcattaaagtgctgctgcaccttgaaactgaactgatgggcagcgtgcgtgaa
aaagccgaagacgaagcaatcaacgttttcgcccgtaacatgcacgacctgctgatggcc
gctccggcgggcatgcgcgccacgatgggtctcgatcccggcctgcgtactggcgtaaaa
gtcgcggtggtggatgccacaggcaagctggtcgcgaccgatacgatttatccgcatacc
ggtcaggcggctaaagccgctccgatcatcgccgcactgtgcctcaaacatcaggttgag
ctggtggcgattggcaacggtactgcatcgcgtgaaaccgaacgcttcttcctcgacacg
cagaaacagttcccggatatcaaagcacagaaagtgatcgtcagcgaagccggcgcatcg
gtgtactccgcgtccgagctggcggcgctggaattccccgatctggatgtctcgctgcgc
ggcgcagtctctatcgcccgtcgtttgcaggatccgctggcggagctggtgaagatcgac
ccaaaatctatcggcgtgggtcagtatcagcatgacgtaagccaaagtctgctggcgaag
aaactggatgcggtggtcgaagactgtgtaaacgcagtcggcgttgatctgaataccgcg
tccgtggcgctgttaacgcgtgtcgccggactcacgcgcatgatggcgcaaaatattgtg
acctggcgtgatgagaatggccgcttccacaatcgcgaacagctgctgaaagtcagccgt
ctggggccaaaagcctttgaacagtgtgcgggcttcctgcgcatcaacaacggcaacaac
ccgctggatgcctccaccgttcacccggaagcctatccgatcgtggaacgtattctggcc
gcgaccgagcaagcgttgcaggagctaatggggaaccccaacgcgctgcgtaacctgaaa
ccgtcggatttcaccgatgagcgtttcggcgtgccgacggtaaccgacatcatcaaagag
ctggaaaaaccgggtcgcgatccacgtcctgagttcaaaaccgccagcttcgccgacggc
gtggaaaccttaaacgatctcctgccgggcatgattctggaaggtgccgtcaccaacgtc
accaactttggtgcgtttgtggatatcggcgtccatcaggacggtttggtacacatttca
tcactggccgaccatttcgtcgacgatccgcacaaggtcgtgaaagctggcgatatcgtc
aaagtgaaagtgatggaagtggatctacagcgtaagcgtatcgcgctgaccatgcgcctt
gatgaacagccgggcgacaccgcatcacgccgtggcggtggcaatgcgcgtggcgatagt
aatacttcatcgcgtcagcctgccggtaaatcacgtcctcgcccagccagcgcccctgtc
gctggcaacagcgcgatgggcgatgctctggctgccgcctttaaaaagcgctaa
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