Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_039570
Help
Entry
PCC21_039570 CDS
T02320
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc03420
Nucleotide excision repair
pcc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PCC21_039570
03430 Mismatch repair
PCC21_039570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcc03400
]
PCC21_039570
Enzymes [BR:
pcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PCC21_039570
DNA repair and recombination proteins [BR:
pcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PCC21_039570
MMR (mismatch excision repair)
Other MMR factors
PCC21_039570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
PhoH
Motif
Other DBs
NCBI-ProteinID:
AFR05360
LinkDB
All DBs
Position
complement(4484254..4486416)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDGLNDKQRDAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIDHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIRALNLDEKQWPPRQAMWFINGKKDEGLRPQHIESYGNPIEQTWQRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHVLNHYRERFTNILVDEFQDTNRIQYAWIRMLAGDS
AKVMIVGDDDQSIYGWRGAQVENIQLFLKDFAGAETIRLEQNYRSTSNILKAANALIAHN
GGRLGKNLWTDGVEGEPISLYCAFNELDEARYVVNRIKTWHENGGALKDNAILYRSNAQS
RVLEEALLQQSMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQSTRALLQEKVLAGRAAASLQRFIELIDALAYETSELPLHIQ
TDRAIKDSGLWSMYEQEKGEKGQARVENLEELVTATRQFSYQEEDQDLMPLQAFLSHAAL
EAGEGQADANQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMEKLTITYAESRRLYGKEAYHRPSRFVGELPEECVEEVRLRASVSRPVNHQRLG
TPITQNDSGYKLGQRVRHAKFGEGTIVNLEGSGDHARLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatctgctcgatggcctcaacgacaaacagcgtgacgcggtagccgcg
ccgcgcagcaatttattggtgctggcgggggcaggcagcggcaaaactcgggtactggtt
catcgcattgcctggctcttgtctgtcgaaaactgttcgccgtattccattatggcggtg
acgtttaccaacaaagcagcggcggagatgcgccatcgtatcgatcatttgatcggcact
agccagggtggcatgtggatcggtactttccacgggctggcacaccgcctgctgcgtgcg
caccatatggatgccaatctgccgcaggatttccagattctggacagcgaagatcagctg
cgtctgctgaagcgtctgattcgggctctgaatctggatgagaagcagtggccgccgcgt
caggcgatgtggttcatcaacggaaagaaagatgaggggctgcgcccgcagcacattgaa
agctacggcaaccctatcgaacaaacgtggcagcgcgtgtatcaggcctatcaggaagcg
tgcgatcgtgccgggctggtggatttcgccgagctgctgctgcgcgcgcatgaactgtgg
ctgaacaagccgcatgtgctgaaccactatcgcgaacggtttaccaacattctggtggac
gaattccaggataccaaccgcattcagtacgcctggatccgtatgctggcgggcgacagc
gccaaggtgatgatcgtcggggatgacgatcagtcgatttatggctggcgcggggcgcag
gtcgaaaatattcagctgttcctgaaagatttcgccggtgcagaaacgatccgtctggag
cagaactaccgttcgaccagcaacatcctgaaagcggcgaatgcgctgatcgcgcataac
ggcgggcggctcggaaaaaacctgtggaccgatggcgtagaaggcgagcctatctcgctg
tattgcgcattcaacgaattggatgaagcgcgctacgtcgttaatcggattaaaacctgg
catgaaaatggcggtgcgctgaaagataacgccattctgtatcggagcaatgcccagtcg
cgcgtactggaagaggcgctgttacagcagagtatgccgtaccgtatctacggcggcatg
cgcttcttcgaacgtcaggaaatcaaagatgcgctgtcttatctgcgcctgatcgctaat
cgtaacgatgatgcggcgttcgagcgtgtggtaaatacgccgacgcgcggcattggcgat
cgcacgctggacgtggtgcgtcagacggcgcgcgatcgtcaactgacgctgtggcaatcc
acgcgcgcgctgttgcaggaaaaagtgctggctgggcgggcggcggcatcgctgcaacgc
tttatcgagctgatcgatgcgctggcctatgaaacctctgagctgccgctgcatattcaa
accgaccgggcgattaaggattccggcctgtggagcatgtacgaacaggaaaaaggcgag
aaggggcaggcgcgggtagaaaacctggaagaactggtgacggctacgcgccagttcagc
tatcaggaagaagatcaggatctgatgccgcttcaggccttcctgtcgcatgccgcgctg
gaagcgggtgaaggtcaggcggatgccaatcaggatgcggttcagcttatgacgttgcac
tcggcgaaagggctggagttcccgcaggtgtttatcgtcggtatggaagaaggaatgttc
cctagccagatgtcgctggatgaaggcggacgtctggaagaggagcgtcgtctggcttat
gtcggcgtcacgcgcgcgatggaaaagctaacgataacctacgcggaatcccgccgttta
tacggcaaagaagcttatcaccggccttcccggtttgtcggcgagctgccggaagagtgt
gttgaagaagtgcggttacgcgccagcgtctcccgtccggttaatcatcagcgtctcggc
acgccgataacgcaaaacgacagcggctacaaattagggcagcgggttcgccatgcgaaa
ttcggcgaaggtacgatcgtgaatctggaaggcagcggcgatcacgcccgtcttcaggtc
gcgtttcaagggcaaggcattaaatggctggtcgccgcttatgccaaactggaaacggtg
tga
DBGET
integrated database retrieval system
