Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_040420
Help
Entry
PCC21_040420 CDS
T02320
Name
(GenBank) Primosome factor Y, protein n'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PCC21_040420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcc03400
]
PCC21_040420
Enzymes [BR:
pcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PCC21_040420
DNA repair and recombination proteins [BR:
pcc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PCC21_040420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHD_PriA
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_22
TrwB_AAD_bind
AAA_19
Zn_ribbon_6
ArfA
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AFR05445
LinkDB
All DBs
Position
4587121..4589319
Genome browser
AA seq
732 aa
AA seq
DB search
MSVAQVALPVPLARTFDYLLPAGGIAPQVGARVSVSFGNRKAIGIITALSDTSELPLEQL
KPVHDVLDEQPLFPPSLWRILLWAVEYYHYPIGEVLFHALPILLRQGKPAHRAPLWQWFA
TEQGRATPLSTLKRAAKQQQALAALLQSPLYRHQVSEIGLTETALQALRSKGLCELQAAE
QTLHDWRQSFSLATDRLRLNTEQATAVGAIRSEDNHFAAWLLAGITGSGKTEVYLSVLEN
VLAQGKQALVLVPEIGLTPQTIARFRERFNAPVDVLHSALNDSERLAVWLRARSGEAAIV
IGTRSALFTPFARLGLIVIDEEHDSSYKQQEGWRYHARDLAVFRAREEDIPIVMGTATPA
LETLYNVQIGKYRRLNLTKRAGNAALAKQHVIDLKGLPLTAGLSQPLITRIRHHLTNDNQ
VILFLNRRGFAPVVMCHECGWIAECQRCDHYYTYHQHQRMLRCHHCDSQRPVPQQCPGCG
STNMVPVGLGTEQLEQSLAPIFPDVPITRIDRDTTSRKGALEQQLSQVRQGGARLLIGTQ
MLAKGHHFPDVTLVALLDVDGSLFSADFRAAERFAQLYTQVAGRAGRAGKAGEVALQTHH
PEHPLLQTLLQQGYDAFASQALTERKSVFLPPFTSHILFRADDHDNQQAALFLQQLRNLL
EASPLRDESLWLLGPVPALQPKRAGRFRWQLLLQHPSRALLQKLVRTSLTLIGTLPQARK
VKWMLDVDPTDG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgctcaggtcgctttgcccgtgccattggcacgtacattcgattatttgcta
cccgcaggaggcatcgctccgcaggtcggcgcgcgcgtcagcgtctcctttggtaaccgt
aaagcgatcggcattattaccgcgctgagcgacaccagcgaacttccgcttgagcaatta
aaacccgtgcatgacgtgctggacgaacagccgctgttcccccccagcctgtggcgcatt
ttgctgtgggccgttgagtactatcattacccgattggcgaagtgctgttccacgcgctg
ccgatcctactgcgtcaggggaaacccgcacaccgtgccccgctctggcagtggtttgcc
accgaacagggtcgggcgacgccgctcagcacgctcaaacgcgccgcgaaacagcaacag
gctctggcggccttacttcagtcgccgctttatcgccatcaggtgagcgaaatcgggctg
acggaaacggcgttgcaggcgctgcgcagtaaaggactgtgcgaattgcaggccgcagag
caaacgcttcacgactggcgtcaaagttttagtttggcaaccgaccgactgcgtttgaat
accgaacaggccactgccgtcggcgcgatccgcagcgaagataatcattttgccgcctgg
ctgctcgcgggtatcaccggttcgggaaaaaccgaagtctatctcagcgtgctggaaaat
gtgctggcacagggcaaacaggcgctggtgttagtaccggaaattggcctgacgccgcaa
accatcgcccgcttccgtgaacgctttaacgccccggtggatgtgctgcactcggcactc
aacgacagcgaacgccttgccgtctggctacgtgcccgcagtggtgaagccgccatcgtc
atcggaacgcggtcggcgttatttacgccctttgcccgtttggggctgattgtgatcgat
gaagaacacgacagttcctacaaacagcaggaaggctggcgctatcacgcacgtgatttg
gcggtcttccgcgctagggaagaagatattcctatcgtcatggggacggcgacgcccgcg
ctggaaacgctgtataacgtccagatcggcaagtatcgacgcttgaatctgaccaaacga
gcgggcaatgccgcgctagccaaacagcacgtcatcgatctgaaaggactgccgctgacg
gccgggttatcccagccgctgattacccgcatccgccaccatctgacgaacgataatcag
gttatcttgtttcttaatcggcgtgggttcgcccccgtggtaatgtgccacgagtgcggc
tggattgccgagtgtcagcgctgcgatcactactatacctaccaccagcatcagaggatg
ctgcgctgccaccactgcgacagccagcgtcccgttccacagcagtgccccggctgcggc
tcaaccaatatggtaccggtcggtctgggtaccgagcagttggaacaaagccttgcgccg
atctttccagatgtcccgatcacccgcatcgaccgtgataccaccagccgtaaaggggcg
cttgagcagcagctctcgcaggtcaggcagggcggcgcacgtcttctcatcggcacacag
atgctggcaaaggggcatcatttccctgacgtgacgctagtggccctgctggacgtggac
ggttcgctgttctctgccgacttccgcgcagccgaacgttttgcgcagctctatactcag
gtggcgggtcgcgcaggacgtgcaggcaaggcgggtgaagtggcgctgcaaactcaccac
ccggaacatccgctattacaaacgctgctgcaacaaggctacgatgcctttgccagccag
gcgctgactgaacggaaaagcgtttttctgccgccgtttaccagccatattctcttccgc
gctgacgaccacgataatcagcaggccgcattattcctccagcagttgcgtaatttgctg
gaggcgagtccgctgcgggatgaatcactctggctactaggcccagtccctgctttgcaa
cccaaacgtgcgggacgcttccgctggcagctcttgctacagcacccctccagagcgcta
ttgcagaaactggtcagaacatcgctgacgctaatcggcacgctgccgcaggcgcgtaaa
gtgaaatggatgctggatgtcgaccccacggacggttag
DBGET
integrated database retrieval system
