Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_042370
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Entry
PCC21_042370 CDS
T02320
Name
(GenBank) hypothetical protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc00040
Pentose and glucuronate interconversions
pcc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PCC21_042370
Enzymes [BR:
pcc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
PCC21_042370
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
DUF4384
Motif
Other DBs
NCBI-ProteinID:
AFR05640
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Position
4808381..4810615
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AA seq
744 aa
AA seq
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MKRCSSPKCDSLRKHRSSRLAAVALTNALLFSFSTHAATESTPVWHGIAFGQSTDVNFSS
NVLPEKIGVNDVTINGKKLAPGDNADLSAPITIESRGGKIANTHDGLTFFYTQLPANVNF
TLQSDITVEQFGPENGAKPAAQEGAGILVRDIIGVPRQEPLKEGYEEFPAASNMVMNAIM
TQDKKSHTEIKLQAILRNGVTQPWGNAGAKITKTSYQENVNLEQTPTFRLKLERTNDGFI
TSYAPKGTDNWVSKEVKGADVVTKLDKDHYYVGFFASRNAKITVSNAQLTTTPAQTKASP
EFKAKAYDPLLQVMSSPKTTSEHYVVQARANYAGTITVSQNSQPLGEAKQVKAGETLSLP
AKIAGNSAEFKIAYQPTEGDDKAVKESTFKVERVAYADAKNLYVSPQGSASNDGSKNAPI
DLASAVAALPAGGTIWLNDGDYSATEIPVSASGQQKTVKNLFAVGNKAVIHGLQLKASHW
HVKGIEITEKPFRIEGSYNTIERVLAHHADDTGIQVTSTADVGRPLWASHNLILNSESHS
NQDPGKINADGFAVKMRVGEGNVIRGAFSHNNIDDGFDLFNKIEDGANGVVVIENSIAMN
NTSNGFKMGGEGQPVAHQVKNSIAVGNKLDGFTDNFNPGALIVEDNIALDNERFNFIFRP
SPYSGPEKQGVFKNNVSLKTKAGKYDDAVVGNIDNTNYFIKGDRSVNAQGKEITVNNFVS
VAIPETFTRDAKGNLVLGDFLKKK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgttgttcttcaccaaaatgtgattcattacggaaacaccgttcttcacgcctc
gcagccgtcgcgttgacgaatgcattactctttagctttagtacacacgccgcgacagaa
tcaacccctgtctggcacggcatcgcctttggtcaatcaacagacgtaaacttctcatcc
aatgtcctgccggaaaagattggtgttaacgacgttaccattaatggcaagaaattagca
ccgggggataacgctgatttgtccgcccctatcacgatcgaaagtcgtggcggaaagatt
gccaacacccatgacgggctgacgttcttctatacgcagttgcctgcgaatgtgaatttt
acgcttcagtctgacattaccgtggaacagtttgggccagaaaacggcgctaagccggcg
gctcaggaaggggccggaattctggtgcgcgatattatcggcgtgccgcgtcaggaaccg
ctgaaagaagggtatgaggagttccctgcggcatccaacatggtgatgaacgccatcatg
acgcaggataagaagtctcataccgaaatcaaattgcaggctattttgcgtaatggcgtc
acacagccgtggggcaatgccggtgcgaaaattaccaagaccagctaccaggaaaatgtg
aatctggagcaaacgccgacgttccgtctgaagctggaacgtaccaatgacggctttatt
acctcttatgcgccgaaaggcacggataactgggtatcaaaagaagtcaaaggcgcggac
gtcgtcaccaagctggataaagaccactactacgtcggtttctttgcttcccgtaacgcc
aaaatcaccgtcagcaatgcacagttgactaccacgccggcgcagaccaaagcgtcaccg
gagttcaaggctaaggcctatgatcctttgctccaggtgatgtcatcgcctaaaaccacc
agcgaacactatgtcgttcaggccagagccaactacgccggcacgatcacggtgtcgcaa
aacagtcagcctctgggtgaagcgaagcaggtaaaagcgggagaaaccttatctctgcca
gcgaaaattgccggtaatagcgctgagttcaagattgcctaccagcctacggaaggcgat
gataaagcagtaaaagagagcacgttcaaggttgaaagagtggcctacgcagacgctaaa
aatctgtatgtttcgccacaaggttcagccagcaatgacggcagtaaaaatgcacctatc
gatttagccagcgccgtcgccgctctgccagctggtggcacaatctggctcaacgatggt
gattacagcgcaactgaaatccctgtcagcgccagcggccagcaaaaaaccgtcaagaac
ctgtttgctgtcggcaataaagccgtgattcatggcctacagctgaaagcaagccattgg
catgttaaagggattgaaatcacagagaaaccgttccgtatcgaggggagctacaacacc
atcgaacgcgttctggcgcaccacgctgacgataccggtattcaggtgacttcgacggcc
gatgtaggcagaccgctgtgggctagccataacctgattctgaattcagaatctcacagt
aatcaggacccaggcaaaattaacgccgacggtttcgcggtgaaaatgcgtgtgggtgaa
ggcaacgtgattcgcggcgcgttctcgcacaacaatatcgatgatggcttcgacctgttt
aacaaaattgaagacggcgcaaacggcgttgtggtgatcgagaattcaattgccatgaac
aacaccagcaacggtttcaaaatgggtggtgaaggccagccagtggcgcatcaggttaaa
aacagcattgctgtgggcaacaaacttgatggtttcactgacaacttcaaccctggtgcc
ttgatcgttgaagacaacatcgcgttagataacgaacgctttaacttcattttccgccca
agcccttactctggtccggaaaaacaaggcgtcttcaagaacaacgtttcgctgaaaacc
aaagcgggtaaatatgatgatgcggttgtcggcaatatcgataacaccaactacttcatc
aaaggcgaccgttcggttaacgcgcaaggtaaggaaatcaccgtaaataatttcgtgtca
gtagccattcctgagacgtttacgcgtgatgccaaaggcaatctggtacttggcgacttc
ctgaagaaaaaataa
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