Mixta calida: C2E16_00345
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Entry
C2E16_00345 CDS
T05419
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
pcd
Mixta calida
Pathway
pcd03030
DNA replication
pcd03430
Mismatch repair
pcd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C2E16_00345
03430 Mismatch repair
C2E16_00345
03440 Homologous recombination
C2E16_00345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcd03032
]
C2E16_00345
03400 DNA repair and recombination proteins [BR:
pcd03400
]
C2E16_00345
Enzymes [BR:
pcd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C2E16_00345
DNA replication proteins [BR:
pcd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C2E16_00345
DNA repair and recombination proteins [BR:
pcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C2E16_00345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AUY23507
LinkDB
All DBs
Position
75110..76210
Genome browser
AA seq
366 aa
AA seq
DB search
MKFIVEREQLLKPLQQVSGPLGGRPTLPILGNLLMQVNDGSLSLTGTDLEMEMVARVALT
QPHEPGATTVPARKFLDICRGLPEGAEISVVLEGDRMLVRSGRSRFSLSTLPASDFPNLD
DWQSEVEFTLPQATLKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVC
SMPVGQSLPNHSVIVPRKGVTELVRMLDGGDTPLQIQIGGSNIRAHVGDFIFTSKLVDGR
FPDYRRVLPKNPDKTLEAGCDLLKQAFARAAILSNEKFRGVRLYISQNQLRITANNPEQE
EAEEILDVTYGGSDLEIGFNVSYVLDVLNALKCENVRLLLTDSVSSVQIEDEASQSAAYV
VMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattgtagaacgcgagcaattacttaaaccgctgcagcaggtgagcggtccg
ttaggcggtcgtccgacgctgccgattctgggcaacctgttaatgcaagtgaatgacggc
agcctgtcgctgaccggcaccgatctggagatggagatggtggcgcgcgtcgcgctgacg
cagccgcatgagccaggcgccactaccgtgccggcgcgtaagttccttgatatctgccgt
ggtctgccggaaggcgccgagatcagcgtggtgctggaaggcgacagaatgctggtgcgc
tccggccgcagccgcttttcgctctccaccctgcccgccagcgacttcccgaatctggac
gactggcagagcgaggtagagtttactctgccgcaggcgacgctaaagcgcctgattgag
gcgacgcagttctcaatggcgcatcaggatgtgcgttattacctcaacggcatgctgttt
gaaaccgaaggtgaagagttgcgcaccgtcgcgaccgacggacaccgcctggcggtctgt
tcgatgccggtcggccagtcgctgccgaaccattcggtgatcgtgccgcgtaaaggcgtc
accgagctggtgcgtatgctggacggcggcgacacgccgttgcaaattcagattggcggc
agcaacattcgcgcgcacgtcggcgactttatcttcacctccaagctggtggatggtcgt
tttccagactaccgtcgcgtgctgccgaaaaacccggacaaaacgctggaggcgggatgc
gatctgctgaagcaggcgttcgcccgcgccgcgattctgtcgaatgagaaattccgcggc
gttcgactctatatcagccaaaaccagctgcgtattacggcgaacaacccggaacaggaa
gaagcggaagagatcctcgacgtcacctatggcggcagcgatctggagatcggctttaac
gtcagttacgtgctggatgtgctgaacgcgctgaagtgcgaaaatgtgcgtctgctgctg
accgactcggtatccagcgtacagattgaagatgaggcgagtcaaagcgccgcgtatgtc
gtgatgccgatgcgtctttga
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