Mixta calida: C2E16_01325
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Entry
C2E16_01325 CDS
T05419
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pcd
Mixta calida
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcd03016
]
C2E16_01325
Enzymes [BR:
pcd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
C2E16_01325
Transfer RNA biogenesis [BR:
pcd03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
C2E16_01325
Prokaryotic type
C2E16_01325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
ChrB_N
DBD_Tnp_Mut
Motif
Other DBs
NCBI-ProteinID:
AUY23679
LinkDB
All DBs
Position
298377..299288
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AA seq
303 aa
AA seq
DB search
MQLTFLGTCAGTPSLQRNVTSIALTLSHRGDCWLFDCGEATQHQFMRSALKPGKLQKIFI
THLHGDHIFGLPGLLTSRSMGGIPEPLTIYGPPGLRQFVETALSLSGSFVTYPLEIVEIA
AGELFDDGAIKVTAFSLNHVLPCFGFRIEQHDKPGFLDAEKLRADNVPRGPWFQQLKQGQ
SVTLEDGRVIHGRDYLGPSTPGKKLAIFGDTAPTENALALAAEVDVMVHETTLEAAMEEK
ANGRGHSTTVQAATAARDARAKRLIATHFSSRYRSEDMPRLLAECQAIFPNTELARDFAV
FEV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgacttttcttggcacctgtgctggcacgcccagcttacagcgtaatgtgact
tctatcgccctgacgctttctcatcgcggcgactgctggctgtttgactgcggcgaggcc
acgcaacaccagtttatgcgcagcgccctgaaaccgggcaaactgcaaaaaatctttatc
acgcacctgcacggcgatcatattttcggcctgccgggactgctgaccagccgctcgatg
ggcggcatccctgagccgctgacgatttacgggccgccagggctgcgccagtttgtcgaa
accgcgctgagcctgagcgggtcgtttgtcacctatccgttggagatcgttgaaatcgcg
gcgggcgaactgttcgacgacggcgcgatcaaggtcacggccttttcgctgaatcacgtc
ttgccctgcttcggctttcgcatcgaacagcatgacaagccgggttttctcgacgcggaa
aaactcagggcggacaacgtgccgcgcggcccctggttccaacagctgaaacagggccag
agcgtcacgctggaggatggccgcgttattcatggccgtgactatcttggcccctcgacg
ccgggtaaaaagctggcgatattcggcgacaccgcgccgaccgagaacgcgctggcactg
gcggcggaggtagacgtgatggtgcatgaaaccacgctggaggcggcaatggaggagaaa
gccaacggacgcggccattccactaccgtacaggcggcgaccgccgccagagacgcgcgc
gccaaacggcttatcgccactcatttcagctcacgctatcgctctgaggatatgccgcgc
ctgctggcggagtgccaggcgattttccctaacaccgaactggcgcgcgattttgccgtc
ttcgaggtataa
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