Mixta calida: C2E16_01605
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Entry
C2E16_01605 CDS
T05419
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pcd
Mixta calida
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcd03021
]
C2E16_01605 (rpoH)
Transcription machinery [BR:
pcd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C2E16_01605 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
IF2_N
HTH_10
HTH_3
UCR_14kD
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AUY23731
LinkDB
All DBs
Position
359725..360582
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AA seq
285 aa
AA seq
DB search
MTKEMHTLAIAPLGNLESYIRAANTWPMLTAEEEKALAERLHYQGDLDAAKTLILSHLRF
VVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDM
TFDLTSDDESSEGKSMAPVLYLQDKTSDFADGIEEDNWENHAADKLSDALQGLDERSQHI
IRARWLDDDNKTTLQELADKYGVSAERVRQLEKNAMKKLRMAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcacactttagctattgctcctcttggtaacctggaatcttatatt
cgggctgccaatacctggccgatgctaacggcagaagaggaaaaagcgctggctgaacgg
ctgcattaccagggcgatctggatgcggctaaaacgctgatcctgtcccacctccgcttt
gttgttcatatcgctcgtaactacgcgggctacggcctgccgcaggcggatctgattcag
gaaggcaacatcggcctgatgaaagcggtgcgccgcttcaaccctgaagtcggggttcgt
ctggtgtcgttcgctgttcactggattaaggcggaaattcacgagtatgtgctgcgtaac
tggcgcatcgtgaaagtggccaccacaaaagcgcagcgcaaactgttttttaacctgcgt
aaaaccaagcagcgtctgggctggtttaaccaggatgaagtggagatggtggcgcgtgag
cttggcgtgagcagcaaagacgtccgcgaaatggaatcgcgcatggcggcgcaggatatg
acttttgacctgacctcggacgatgaatccagcgaagggaaaagcatggcgccggtgctt
tatctgcaggataaaacctctgactttgctgacggcatcgaagaggacaactgggaaaac
catgcggccgataagctgagcgatgcgctgcagggcctggatgaacgcagccaacatatt
attcgcgcccgctggctggacgacgacaataaaactacgttacaggagctggccgataaa
tatggcgtctccgccgagcgtgtacgtcagctagagaaaaacgcgatgaaaaaattgcgt
atggcgatcgaagcataa
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