Mixta calida: C2E16_03980
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Entry
C2E16_03980 CDS
T05419
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
pcd
Mixta calida
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcd03000
]
C2E16_03980
Transcription factors [BR:
pcd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
C2E16_03980
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
EFG_III
Motif
Other DBs
NCBI-ProteinID:
AUY24152
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Position
837665..838555
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AA seq
296 aa
AA seq
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MSQINYNHLYYFWQVCKQGSIVSAAETLFLTPQTITGQIKALEERLQGKLFRRQGRGIVP
TELGQLVFRYADRMFTLSQEMMDIVNYRKESNLLFDVGVADALSKRLVSKVLETAVQDDE
RIHLRCFESTHEMLLEQLSQHKLDMILSDCPVDSTQQEGLFSVKLGECGVSFWCTPPLPQ
RPFPACLEERRLLIPGRRSMLGRQLQRWLSAQALQVEILGEFDDAALMKAFGAANHAIFV
APTLYGQDIYHDSDIQEVGRLEEVMEEYYVIFAERMIQHPAVQRICNHDFSALFCG
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagattaactataaccacctctactatttctggcaggtttgcaagcagggttcg
attgtcagcgcggcggagacgctttttctcacgccgcagactatcaccggccagattaag
gcgcttgaggaacggttgcagggcaagctgttcaggcgacagggcaggggtattgtgccg
actgagttagggcagctggtgttccgctacgccgatcgcatgtttacgctcagccaggag
atgatggacatcgtgaactaccgcaaggagtccaacctgctgtttgatgtcggcgtggcg
gacgcgctgtcgaagcggctggtgagtaaagtgctggaaacggcggtacaggatgatgaa
cgcatccatttacgctgtttcgaatcgacccatgaaatgctgctggaacagcttagccag
cataagctcgatatgatcctgtccgactgtccggtagattctacccagcaggaggggctg
ttctccgttaagctgggcgaatgcggcgtcagcttctggtgcacgccgccgctgccgcag
cggccgtttcccgcctgtcttgaggagcggcgcctgttgatccccggacggcgctctatg
ctgggccgtcagctgcagcgctggctgagcgcgcaggcgctgcaggtagagattctcggc
gagtttgacgatgcggcgctgatgaaagccttcggcgccgctaatcatgccatttttgtc
gcgcccacgctttacggtcaggatatttatcacgacagcgacattcaggaggtgggaagg
ctggaagaggtgatggaagaatactatgtgattttcgccgaacgcatgatccagcatcca
gccgtgcagcgtatttgcaatcatgatttttccgcattattttgcggttga
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