Mixta calida: C2E16_04380
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Entry
C2E16_04380 CDS
T05419
Name
(GenBank) HAMP domain-containing protein
KO
K05874
methyl-accepting chemotaxis protein I, serine sensor receptor
Organism
pcd
Mixta calida
Pathway
pcd02020
Two-component system
pcd02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C2E16_04380
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
C2E16_04380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pcd02035
]
C2E16_04380
Bacterial motility proteins [BR:
pcd02035
]
Flagellar system
Chemotaxis proteins
MCPs
C2E16_04380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MCPsignal
TarH
HAMP
TryThrA_C
HsdM_C
Motif
Other DBs
NCBI-ProteinID:
AUY24224
UniProt:
A0ABM6RZ12
LinkDB
All DBs
Position
complement(934922..936610)
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AA seq
562 aa
AA seq
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MLKRIRIVTGLFAVLLIFTLLQMATGGISLIGNKHANNAFHEQQTIQNEQVALNQSWAAL
LQTRNALNRAATYFLALEAYADNNNQDEINTLFHSLIHDSRSYLSNAERFWKDYNDILNG
LAQDKEAFKQLDRSYADFHKALSEMAIQLEKKQIQQFLDYPAQKYQDDFQTQLNQYYKNN
REKLLQGTENIQRNYEVNLWILIATLSFTVFMALLAWYGLRKILIIPLNKLLENIRSFAG
GDLVSVIEVDGTNEMGQLAAGLRNMQAALTVTVGEVRNSADAIFSGASEISQGNNDLSSR
TEQQAASLEETAASMEELTATVKQNAENAAQASKLARNATGIAQRGGTVVDNVVSTMNDI
VTSSQKISEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAHRSAQAA
KEIKGLIEESASKVEAGTSLVSTAGETMNEIVKAVTEVTGIMSEIASASEEQSRGIDQIA
VAVSEMDQVTQQNASLVEQSATAAAALEELSGRLTEAVAVFRINSTGRQSKRNDQDGNKP
AIKAPDLKPLNTSEPQEGWTTF
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaacgtattcgaattgttacaggattgtttgcagtattgctgatatttactttg
ctgcaaatggcgaccggggggatttccctcattggaaataaacacgcaaataatgccttt
catgagcagcagactatccaaaacgaacaggtggcattgaatcagtcatgggcggcatta
ttacagacaagaaatgccctgaaccgggcagctacttatttccttgcacttgaggcatat
gcagataataacaatcaggatgagataaacacactttttcattcgcttatccatgacagc
agaagctacctcagtaacgccgaacgtttctggaaagactataatgatatactcaacgga
ctggcgcaggataaagaagcgtttaaacagttagatagaagctatgccgactttcataaa
gcgctttctgaaatggctatccagctggagaaaaagcaaatacagcagttcctggattac
cctgcacaaaaataccaggacgattttcagacacagttaaatcagtattacaagaataac
cgggaaaaacttttacagggaactgaaaacattcaacgtaattatgaagtcaatctctgg
atactgattgcaacgctttctttcaccgtttttatggccctcctcgcctggtatgggctt
cggaaaatactcattattcccctcaacaaactcctcgaaaatatccgctcttttgccggt
ggggatcttgtttccgtaattgaagttgacggcaccaatgagatggggcagttggccgca
ggcctgagaaatatgcaggcagcgcttacggtgacagtgggggaagtacgcaacagcgca
gacgccatttttagcggtgcgagtgagatttcacagggtaataacgatctttcctcacga
accgagcagcaggcggcctcgctggaggaaacggcagcgagtatggaggagctgacggcg
acggtgaagcagaacgcggaaaatgccgctcaggcaagcaagcttgcacgtaatgccacc
ggcattgcccagcgcggcggcacagtcgtggataacgtagtcagcaccatgaatgatatc
gtcaccagctcgcagaaaatttctgagattattagcgtaattgacggcattgcctttcag
acaaacattctcgcgctgaatgcagcggtggaagcagcccgcgcgggtgagcaggggcgc
ggattcgcggttgtggcaggggaagtccgtaatctggcgcaccgcagcgcgcaggctgct
aaagaaatcaaggggctgatcgaagagtccgcaagcaaggtggaagccgggacgagcctt
gtgagcacagcaggggaaacgatgaacgagatagtgaaagcggtaaccgaggtgaccggc
atcatgtccgaaattgcctcggcttcagaagagcagagccggggtatcgatcagattgct
gtcgctgtctcagaaatggatcaggtgacccagcagaacgcttcactggttgagcaatcg
gccaccgcagcggctgcgctggaagaactatccggtcgcttaacggaggcggttgccgtg
ttccgtataaacagcacaggtcgccagtctaaacggaacgatcaggacgggaacaagcct
gccatcaaagcgcccgatctaaaaccgctgaatacgtcagaaccgcaggagggatggaca
acgttctag
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