Mixta calida: C2E16_04640
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Entry
C2E16_04640 CDS
T05419
Name
(GenBank) CdaR family transcriptional regulator
KO
K02647
carbohydrate diacid regulator
Organism
pcd
Mixta calida
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcd03000
]
C2E16_04640
Transcription factors [BR:
pcd03000
]
Prokaryotic type
Helix-turn-helix
Other families
C2E16_04640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
Motif
Other DBs
NCBI-ProteinID:
AUY24272
UniProt:
A0ABN5HC40
LinkDB
All DBs
Position
997456..998613
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AA seq
385 aa
AA seq
DB search
MANYHLDARLAQDIVARTMKIIDSNVNVMDARGRIIGSGDRERIGELHEGALLALSQARV
VDIDEAVARHLHGVRPGINLPLRIAGEIVGVIGLTGDPVSLRQYGELVCMTAEMMLEQGR
LLHMLAQDSRLREELVLNLIRSETLSPALMEWAQRLGIDINQPRVAAVVEVDSGQLGVDS
AMAELQQLQTLLTTPERDNLIAIVSLTEMVVLKPALNAHGRYDQDDHRRRVELLLGRMKE
SGHLRIRIALGNYFTGAGSIARSYRTARTTMAVGKQRMPDQRSYFYQDLVLPVLLDSLRG
GWQANELSRPLMKLKAMDNNGLLRRTLLAWFSHNVQPSATARALFIHRNTLEYRLNRISE
LTGLNLNQFDDRLLLYVALQLDEQP
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggctaactatcacctggatgctcgtctggctcaggatatcgtggcgcgcaccatgaag
attatcgacagcaacgtcaacgtgatggacgcacgcggccgcattatcggcagcggcgat
cgggaacgtatcggtgaactacacgaaggggcactgctggcgctgtcgcaggcgcgcgta
gtggatatcgatgaagccgtggcgcgtcatctgcatggcgtgcggccaggcatcaaccta
ccgctgcgtatcgccggcgagattgttggcgtcattgggttgaccggcgatccggtttcg
ctgcgccagtatggcgagctggtctgcatgacggcggagatgatgctggagcaggggcgg
ctgctgcatatgctggcgcaggatagccgcctgcgcgaagagctggtgttgaatctgatc
cgcagcgagacgctttcgccagcgctgatggagtgggcgcagcgactggggatcgatatc
aatcaaccgcgcgtggcggcggtggtcgaggtggacagcgggcagctgggcgtcgacagc
gcgatggcggagctacagcagctgcaaacgctgctgaccacgccggagcgcgataacctg
atcgccattgtgtcgctgacggagatggtggtgctgaaaccggcactgaacgcgcatgga
cgttacgatcaggacgatcatcgccgccgcgttgagctgctgctggggcgtatgaaagag
agcggccatctgcgcatccgcatcgcgctgggcaactacttcaccggcgcaggcagcatc
gcccgctcttaccgcacggcgcgcactacgatggcggtaggcaagcagcggatgcccgat
cagcgcagctatttttatcaggatctggtgctgccggtactgctggacagcctgcgcggc
ggctggcaggccaatgagctgtcgcgtccgctgatgaaactcaaagcgatggacaacaac
ggcctgttgcggcgcacgctgctcgcctggttcagccataacgtacagccgtcggcaacg
gcgcgggcgctgtttattcatcgcaatacgctggaataccggctgaaccgtatttccgag
ctgaccgggctgaatctgaaccagtttgacgatcggctgctgctctacgtggcgctgcag
ctggatgaacagccctga
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