Mixta calida: C2E16_06380
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Entry
C2E16_06380 CDS
T05419
Name
(GenBank) ROK family transcriptional regulator
KO
K02565
N-acetylglucosamine repressor
Organism
pcd
Mixta calida
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcd03000
]
C2E16_06380
Transcription factors [BR:
pcd03000
]
Prokaryotic type
Other transcription factors
Others
C2E16_06380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ROK
MarR
HTH_24
Fe_dep_repress
MarR_2
HTH_IclR
HTH_Crp_2
FeoC
SMC_ScpB
Rrf2
TrmB
Motif
Other DBs
NCBI-ProteinID:
AUY24574
LinkDB
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Position
complement(1348277..1349497)
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AA seq
406 aa
AA seq
DB search
MTTGGQAQIGNVDLVKQLNSAAVYRLIDQQGPISRIQIAEQSQLAPASVTKITRQLIERG
LIKEVDQQASTGGRRAISIITETRGFHTIGVRLGRNDATVTLYDLSGKALAEEHYPLPQR
TQETLEQALFNAIADFCAAHQRKMRELIAIAVILPGLVDPDNGIIRYMPHITVNNWPLVA
NLRQRFNVTSFVGHDIRSLALAEHYFGASRDCADSILVRLHRGTGAGIIANGQIFLGSNG
NVGEIGHIQVDPLGERCHCGNFGCLETIAANSAIENRVRHLLQQGYSSTLTLDDCSIQAI
SKAANRGDALATEVIEHAGRYLGKAIAIAINLFNPQKIVLAGEITEAEKVLFPAIESCIN
TQTLKAFHKNLPVVRSALNHRSAIGAFALAKRAMLNGTLLQRLLEE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaccactggcggccaggcacaaataggaaatgtcgacctcgtaaaacagttaaacagt
gcagcggtctaccgcctgattgaccagcaggggccgatatcccgtatccagattgcggaa
cagagccagcttgcgcccgccagcgtcacaaaaattacccgccagctgattgaacgcggc
ctgattaaagaggtggatcagcaggcgtccaccggcggccgccgcgcaatttccatcatt
accgaaacccgcggctttcacaccatcggtgtccgtcttggccgcaatgacgccacggtg
acgctgtatgatctaagcggcaaagcgttggcggaagagcactacccgctgccgcagcgg
acgcaggaaacgctggagcaggcactgttcaacgctattgccgatttttgcgcggcccac
cagcgtaagatgcgcgagctgatcgccatcgctgttatcctgcccggtctggtcgatcct
gataacggcatcatccgctatatgccgcatattacggtcaataactggccgctggtcgcc
aacctgcgtcagcggttcaacgtgaccagctttgtcggccacgatatccgcagcctggcg
ctggcggaacactattttggtgcaagccgcgactgtgcggactctattctggtgcgttta
catcgcggcacgggcgcgggcattatcgctaacggccaaatcttcctgggcagcaacggt
aacgttggcgaaataggccacatccaggtcgatccgttaggcgaacgctgccactgcggc
aattttggctgcctggaaaccattgccgccaacagcgcgattgaaaatcgggtgcgccat
ctgcttcagcagggttattccagcacgcttacgctggatgactgttcgattcaggccatc
agcaaagcggcgaatcggggcgatgcgctggcgacagaagtcattgagcatgccggccgc
tatctcggtaaagcgatcgccatcgccatcaacctgtttaacccgcaaaaaattgtgttg
gctggcgagatcaccgaagcggaaaaagtactgttccccgctattgaaagctgtattaac
acgcagacgctgaaggcgtttcacaaaaacttgccggtggtgcgttcagcgctgaatcat
cgttcagcgatcggcgcttttgcgctggcgaagcgagcgatgctgaacggcaccttactg
caacgtctgcttgaagagtga
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