Mixta calida: C2E16_06465
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Entry
C2E16_06465 CDS
T05419
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pcd
Mixta calida
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcd03400
]
C2E16_06465
Enzymes [BR:
pcd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
C2E16_06465
DNA repair and recombination proteins [BR:
pcd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
C2E16_06465
Prokaryotic type
C2E16_06465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AUY24585
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Position
1369342..1370805
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AA seq
487 aa
AA seq
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MATHLVWLRNDLRLNDNSALWAACRRREDRVIALFIATPEQWRRHNMSPRQADYIWRSLQ
LLQQGLAEKGIALHYHQCDDFNAAVSYLQQFCRERQVKALFYNYQYEFNERERDAAVERL
LPQQGVTVQGFDDGVLLPPGSVRTGNQKMYKVFTPFSRACLKRLRDDLPPCLPAPEARAD
ATADEPSTLTPFDYPRHSIDEQLFSPGEAAALRRLREFCRQQVADYPARRDYPAYESTSR
LSVCLAVGTLSPRQCLHRLLREQPHALEAGPGSVWLNELIWRDFYRHLLVAFPALCKNQP
FMAWTKQLAWQQRPEQFNAWCEGKTGFPIVDAAMRQMNATGWMHNRLRMITASFLVKDLQ
IDWRRGERYFMSVLIDGDLAANNGGWQWAASTGTDAVPYFRIFNPTTQGERFDKQGEFIR
RWLPELAAVPDSAIHDPHGWAKKNHQRLDYPQPIVEHKAARQQTLAIFEAARKASPVISP
EQVNEQF
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggccactcatctggtctggctgcgcaacgatctacgcctcaatgacaacagcgcgctc
tgggctgcctgccgccgccgtgaggatcgcgttatcgcgctatttatcgccacgcctgag
cagtggcggcggcataatatgtcgccgcgtcaggccgactatatctggcgcagcctgcaa
ttgttgcagcagggattagcggagaagggcatcgcgctgcactaccatcagtgcgacgat
ttcaacgccgccgtcagctatttgcagcagttttgccgtgaacggcaggtgaaggcgctg
ttttacaactatcagtatgagttcaacgagcgggaaagggacgcggcggtagagcgtctg
ttgccgcagcagggcgtgacggtacagggattcgacgacggcgttctgctgccgccgggc
agcgtgcgcaccggcaatcaaaaaatgtataaggtgtttacgccgttcagcagggcctgc
cttaagcgcctgcgcgacgatttgccgccctgcctgccagcgccggaagcgcgcgccgac
gcgaccgctgacgaaccgtcgacgctgacgcctttcgattacccgcgacattccattgac
gagcaacttttctcgcccggcgaagccgccgcattgcgccgcctgcgcgagttttgtcgc
cagcaggtagcggattatcctgcgcggcgcgattatccggcgtatgagtccaccagcagg
ctttctgtttgcctggccgtcggcacgctgtcgccgcgccagtgtctacatcgtctgctg
cgcgaacagccgcacgcgctggaggcggggccgggcagcgtctggctcaatgagctcatc
tggcgcgacttttaccggcacttactggtcgcttttccggcgctgtgtaaaaaccagccg
tttatggcatggaccaaacagctcgcctggcagcaacggcctgagcagtttaacgcctgg
tgcgaaggaaaaaccggcttcccgattgtggacgccgcgatgcgccagatgaacgctacc
ggctggatgcataatcgcctgcgcatgattaccgccagctttctggttaaggatctgcag
atcgactggcggcggggcgaacgctattttatgtcggtgttgattgacggcgacttagcc
gctaataacggcggctggcaatgggcggcttccaccggcactgacgcagtgccttatttt
cgcattttcaacccaaccacgcagggcgaacgcttcgacaagcagggcgagtttatccgg
cgctggctaccggagctggcggcggtgccggacagcgccatccacgacccgcacggctgg
gcaaagaaaaatcatcaacggctcgattatccgcagccgatcgtggaacataaggcagcg
agacaacaaaccttagcgatttttgaagcggcgcggaaggcgtcgcctgtgatatccccg
gagcaggtgaatgaacaattttga
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