Mixta calida: C2E16_06805
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Entry
C2E16_06805 CDS
T05419
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pcd
Mixta calida
Pathway
pcd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C2E16_06805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcd03400
]
C2E16_06805
DNA repair and recombination proteins [BR:
pcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C2E16_06805
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C2E16_06805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
DUF87
AAA_22
HH_RND_rel
SBDS_domain_II
PRDA1_C
Motif
Other DBs
NCBI-ProteinID:
AUY24645
UniProt:
A0ABN5H7Z3
LinkDB
All DBs
Position
1432798..1434819
Genome browser
AA seq
673 aa
AA seq
DB search
MSKAFKLNSAFQPSGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDAAVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLSRGMIIDQRSILRRLAELQ
YSRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQVESVVPR
FTIYPKTHYVTPRERIVQAMEEIKLELADRRKTLLANNKLLEEQRITQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGQPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGEVIDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRKRVAVNERVLVTTLTKRMAEDLTEYLVEHGERVRYLHSDI
DTVERMEIIRDLRLGEFNVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMARAISETERRREKQIEYNAEHGIVPQGLNKKITDILELG
QSATKGKTRGKPASRSVAEAEASYMALTPQALQKKIHQLEGQMQQHAQNLEFEEAARVRD
QLHELRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcttttaaacttaactccgcctttcagccctccggcgaccagcctgaggcg
atccgccgtctgaaagaggggctggaggacggtctggcgcaccagacgctgctgggggtg
accggctccgggaaaacattcaccgtcgccaacgttatcgccgatctgaaccggccgacg
atggtgctggcgccgaacaagacgctggccgcgcagctctatggcgagatgaaagagttt
ttcccagataacgccgttgagtatttcgtttcttactacgactattatcagcctgaggct
tacgttcccagctctgatacctttatcgaaaaagacgccgcggtgaacgaacatatcgag
cagatgcgtctttccgccaccaaagcgctgctggagcggcgcgatgtgatcgtggtggcg
tcggtgtccgctatttatggtctgggcgatcccgatctctatctgaaaatgatgctgcat
ctgtcgcgcggcatgattatcgatcagcgcagcattttgcgtcgtctggccgagctgcaa
tacagccgtaacgatcaggctttccagcgcggcaccttccgcgtacgcggcgaagtgatc
gatattttcccggcggaatcggacgatatcgcgctgcgcgtagagctgttcgacgaagag
gtcgagcggctctccttgttcgatcccctgaccggtcaggtggaatcggtggtgccgcgc
ttcaccatctatccgaaaacccactacgtgaccccgcgcgagcgcatcgtgcaggcgatg
gaagagatcaagctggagctggccgatcgccgcaagaccctgctggctaacaacaagctg
ctggaagaacagcgcattacgcagcgcacccagttcgatctggagatgatgaacgagctg
ggctactgttccggcattgaaaactattcgcgctacctttccgggcgcggaccgggccag
ccgccgccgaccctgtttgactacctgccggcggatggcctgctggtggtggatgaatcg
cacgtcaccattccgcaaatcggcggcatgtatcgcggcgaccgcgcgcgcaaagagacg
ctggtggagtacggtttccgtctgccgtccgcgctggataaccgtccgctgaaatttgag
gagttcgaggcgctggcgccgcagaccatctacgtatccgcgacgccgggcaactacgag
ctggaaaaatcgggcggcgaagtgatcgatcaggtcgtgcgtccgaccggcctgctggac
ccgattatcgaggtgcgtccggtcgccacgcaggtggacgacttgctttccgaaatccgc
aagcgcgtagcggtgaatgagcgcgtgctggtgacgacgctgaccaagcgcatggcggag
gatctgaccgagtatctggtcgagcacggcgagcgtgtgcgctacctgcactccgatatc
gacaccgtggagcgtatggagattatccgcgacctgcgtctgggcgagtttaacgtgctg
gtgggcatcaacctgctgcgtgaggggctggatatgccggaagtgtcgctggtggcgatc
ctcgacgccgacaaagagggcttcctgcgctccgagcgttcgctgattcagaccatcggc
cgtgcggcgcgtaacgtcaacggcaaggcgatcctttacggcgacaagatcacgccgtca
atggcgcgcgccatcagcgaaacagaacgccgccgcgagaagcagattgagtacaacgcc
gaacacggcatcgtgccgcagggcctcaacaagaaaatcaccgatattcttgagctgggc
cagagcgcgaccaaaggaaaaacgcgcggcaaaccggccagccgcagcgtagcggaagcg
gaggcgagctatatggcgctgacgccgcaggcgctgcaaaagaaaattcatcagctggaa
gggcagatgcagcagcatgcgcagaatctggagttcgaagaggcggcgcgcgtgcgcgat
cagctgcatgagctgcgtgaactctttatcgccgcgtcgtaa
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