Mixta calida: C2E16_07260
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Entry
C2E16_07260 CDS
T05419
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pcd
Mixta calida
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcd03009
]
C2E16_07260
Enzymes [BR:
pcd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C2E16_07260
Ribosome biogenesis [BR:
pcd03009
]
Prokaryotic type
ribosomal protein modification factors
C2E16_07260
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
NTPase_1
CLP1_P
TRAM
RNase_II_C_S1
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AUY24718
LinkDB
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Position
complement(1534988..1536319)
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AA seq
443 aa
AA seq
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MSHTKTSAAPRVGFVSLGCPKNLVDSERILTELRTEGYEVVPRYDDADVVIVNTCGFIDS
AVQESLEAIGEALNSNGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLSHVHRYAP
KPQHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGEVLDEA
KRLVSAGVKELLVISQDTSAYGVDVKHRTGFWNGSPVKTSMVSLCEQLAKLGVWVRLHYV
YPYPHVDEVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGAVERTLERIKRWREICPEI
TLRSTFIVGFPGETEEDFQMLLDFLQEARLDRVGCFQYSPVEGATANQLPDQVPESVKQE
RYDRFMQLQQRISSERLQEKVGREILVMIDEVDEEGAIGRSMADAPEIDGAVYLNGETQL
KAGDVVRVKVEHADEYDLWGSKV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatactaaaacgtccgccgcgccgcgcgttggctttgtttcgctcggctgcccg
aaaaacctggtggattccgaacgcattttgactgaactgcgcactgaaggttatgaagtc
gtgccgcgctacgatgatgcagacgtggtcatcgtcaacacctgcggctttatcgacagc
gcggtgcaggagtcgctggaagcgatcggcgaagcgctgaacagcaacggtaaagtgatc
gtcaccggctgcctcggcgccaaagaggatcagatccgcgaagtgcatccgaaagtgctg
gagattaccggcccacacagctatgagcaggtgctgtcacacgttcatcgctacgcgccg
aagccgcagcacaatccgttcctgagcctggtgccggaacaaggcgtgaagctgacgccg
cgccactacgcttacctgaaaatttccgaaggctgcaaccaccgctgtaccttctgcatc
attccgtcgatgcgcggcgatctcgacagccgtccgatcggcgaggtgctggatgaggcg
aagcgtttggtttccgccggagtaaaagagctgctggtgatctcgcaggatacctccgcc
tacggcgtagatgtgaaacaccgcaccggcttctggaacggctcgccggtgaaaaccagc
atggtcagcctctgcgaacagctggcgaaactgggcgtctgggtgcgtttgcactacgtc
tacccttatccgcacgtggacgaggttattccgctgatggcggaaggcaaaatcctgccc
tacctcgatattccgttacagcacgccagccctcgcatcctgaagctgatgaagcgtcct
ggggcggttgagcgcacgctggagcgcatcaagcgctggcgtgaaatctgcccggaaatc
accctgcgctcgacctttatcgtcggctttcccggcgaaacggaagaagatttccagatg
ctgctcgacttcctgcaagaggcgcgtctggatcgcgtcggttgcttccagtacagcccg
gtggaaggcgcgaccgccaaccagctgccggatcaggtgccggagtcggtgaagcaggag
cgttacgatcgctttatgcaattgcagcagcgcatttccagcgaacgcctgcaggaaaaa
gtgggccgcgagattctggtgatgatcgacgaggtggatgaagaaggcgccatcggccgc
agtatggctgacgcgccggaaatcgacggcgcagtctaccttaacggcgaaacgcagctg
aaagcaggcgatgtggtgcgagtaaaagtcgaacatgccgacgaatacgatctgtggggc
agcaaggtctga
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