Mixta calida: C2E16_07560
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Entry
C2E16_07560 CDS
T05419
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pcd
Mixta calida
Pathway
pcd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C2E16_07560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcd02000
]
C2E16_07560
Enzymes [BR:
pcd01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
C2E16_07560
Transporters [BR:
pcd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
C2E16_07560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
AAA_22
AAA_16
DUF87
AAA_25
RsgA_GTPase
AAA_30
nSTAND3
AAA_29
AAA_18
APS_kinase
ABC_membrane_2
Ploopntkinase3
HUTI_composite_bact
MMR_HSR1
AAA_5
RPW8
Activator-TraM
Motif
Other DBs
NCBI-ProteinID:
AUY24777
UniProt:
A0ABN5H816
LinkDB
All DBs
Position
1605122..1606870
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AA seq
582 aa
AA seq
DB search
MHQDKDLSTWQTFRRLWPMIAPHKAGLIVAAVALIINAAGDTLMLSLLKPLLDEGFGKAD
KSVLIWMPLAVIGLMLVRGVTSYASSYCISWVSGNVVMNMRRRLFNHMMGMPVSFFDQQS
TGTLLSRITYDSEQVASSSSSALVTVVREGASIIGLFIMMFYYSWQLSLILIVLAPIVSM
AIRTVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQDVEAKRFDKVSNRMRHQ
GMKLVSASSISDPVIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKS
LTNVNAQFQRGMAACQTLFSILDSEQEVDNGTRVIERAKGDIEFRNVTFTYPGRDIPALR
DINLSIPAGKTVALVGRSGSGKSTMASLLTRFYDIQQGEILIDGHDLREYTLRSLRNQVA
LVSQNVHLFNDTIANNIAYARNDVYDRAQIEKAAEMAHAMDFIRKMENGLDTVIGENGVL
LSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQSALDELQKNRTSLVIAHRLS
TIEKADEIVVVEDGRIIERGTHDELIGQRGAYAQLHKMQFGQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaagataaagatctctcaacatggcagacttttcgtcgcctttggccgatgatc
gcaccacataaggcgggattaattgtggcggccgtagcgctgatcatcaacgcggcaggc
gacacccttatgctgtcattgctgaaacctttactggatgaggggtttgggaaagccgat
aagtcggtattaatatggatgccgctggccgtaattggcctgatgctggttcgcggagtg
accagctatgcatcaagttactgtatttcttgggtatctggcaatgttgtgatgaatatg
cgtcgccggttattcaaccatatgatgggcatgccggtctcctttttcgatcagcagtcc
accgggacgctgttgtcgcgcattacctacgattctgaacaggtcgcctcttcttcttcc
agcgcgctggttaccgtggtgcgtgaaggggcatcgattatcggcctgttcatcatgatg
ttttactatagctggcagctttcgctaatcctgattgtcctggcgccgattgtctctatg
gcgattcgtaccgtctctaaacgtttccgcagcatcagtaaaaacatgcagaatacgatg
ggccaggtgacgaccagcgcggaacagatgctgaaagggcacaaagaggtactgattttc
ggcggtcaggatgtagaagcgaaacgcttcgacaaggtcagcaaccgtatgcgtcatcag
ggaatgaagctggtctccgcttcttccatctccgatcctgttattcagttgatcgcttct
ctggcgctggctttcgtactttatgccgccagcttccccagcgtaatggataccctgacc
gccggcaccatcaccgtcgtcttttcctcgatgatcgcgctgatgcgtccgctgaaatct
ttaaccaacgttaacgcccagttccagcgcggtatggccgcctgtcaaacgctgttttcc
atcctcgatagcgaacaggaagtggataacggcacgcgtgtcattgaacgcgctaagggc
gatattgagttccgtaatgtgaccttcacctatcctggacgcgatattccggcgctgcgc
gatatcaacctttccatcccggcaggtaaaaccgtggcgctggttgggcgctccggctcc
ggcaaatcgacgatggccagtttgttgacgcgcttttatgatattcagcaaggcgaaatt
ctgattgatggccacgatttgcgcgagtataccctgcgctcgttgcgcaatcaggtcgcg
ctggtttctcagaacgtgcatctgtttaacgacaccatcgccaacaatatcgcctacgcg
cgcaacgatgtttatgaccgcgcgcagattgaaaaagccgctgaaatggcccatgcgatg
gacttcatccgcaagatggaaaacggcctggataccgtgatcggcgagaacggcgtgctg
ctttccggcggtcagcgtcagcgtatcgcgatcgcccgtgcgctgctgcgcgacagcccg
attctgattctggacgaggcgacctcggcactggataccgaatccgaacgcgcgattcag
tctgcgctggatgaactgcaaaaaaaccgcacctcattggtcattgcgcatcgtctgtcg
actatcgaaaaagcagatgaaatcgtggtggtggaagatggccgcattatcgagcgaggc
acgcatgatgagctgatcggccagcggggcgcttacgctcagctgcataaaatgcagttt
gggcaatga
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