Mixta calida: C2E16_09210
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Entry
C2E16_09210 CDS
T05419
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
pcd
Mixta calida
Pathway
pcd02020
Two-component system
pcd02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C2E16_09210
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
C2E16_09210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pcd02035
]
C2E16_09210
Bacterial motility proteins [BR:
pcd02035
]
Flagellar system
Chemotaxis proteins
MCPs
C2E16_09210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
CHASE3
HAMP
Mod_r
4HB_MCP_1
DUF4141
RPW8
DUF3149
Motif
Other DBs
NCBI-ProteinID:
AUY25066
LinkDB
All DBs
Position
complement(1940829..1942385)
Genome browser
AA seq
518 aa
AA seq
DB search
MFKNLTIRRKFILAFGAVIAVMLIICATFYGNFSRIVKANDWNVHTYQVIDESRGLVESL
VNMETGLRGYALNGKEDMLQPFTLGQKAFMEHLEKAKQLTSDNPVQQDRLARLLQQQQNW
TQDFAARLIENRRAVTAGTMPYDLFISEFEANTGKTQMDGMRTIIGEMAGEEQGLLAKRQ
EAVASTTSQTTLTLILGSLLGLAIAITLGYLLTRAITAPLQRAVLAAQAIATGDLTTRLV
ANSRDETGVLIEALATMQAQLTRVVSDIQNAASSIDNAAKEVATGNIDLSSRTEQQAASL
EETSASMEQLTATVRQNTSNAQHASSLASDASQVALRGGDVVGQVVTTMSAIAESSQHIV
DIIGTIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRALAQRSATAAKEIKGLIH
QSTERVTEGTGLVADAGSTMKDIVTSIQRVSEIMNEISTASDEQANGIEHVGLAVAQMDE
VTQQNAALVEQAAAAAASLEDQASHLTRSVAIFKTAHV
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaatttaactatacggcgaaagttcatcctcgctttcggtgcggtcattgca
gtcatgctgattatctgcgccactttctatggcaatttttcacgtatcgtgaaagcaaat
gactggaatgtgcacacttaccaggtgatcgacgaaagtcgcggtctggtggaaagcctg
gtcaatatggaaacgggcctgcgtggttacgcgctcaacggtaaggaagatatgctccag
cctttcacgctgggacagaaagcgtttatggagcatctggagaaagcgaaacagctgacc
tcggataacccagtgcaacaggatcgcctggcgcgtctgcttcagcagcagcagaactgg
acacaggatttcgccgcgcgtctgatagaaaatcgtcgtgcggtcacggccggaacgatg
ccgtatgatctctttatcagcgaatttgaagccaacaccggcaaaacgcagatggatggc
atgcggacgattatcggcgaaatggcgggcgaggagcagggtctgctggcgaagcgtcag
gaagccgtcgcctcaaccacgtcgcaaaccaccctcaccctgattctgggttccctgctc
ggtctggcgattgccatcactctgggctacctgctgacgcgcgctattaccgcgccgctg
caacgcgcggtgttggcggcacaggccatcgccaccggcgatttaaccacccgtctggtg
gcgaactcccgtgatgaaaccggcgtgctgatcgaggcgctggcgacaatgcaggctcag
ctcacccgcgtggtctccgatatccagaatgcggcctcctcaatcgataacgccgcgaaa
gaagtggctaccggcaacatcgatctctccagccgcaccgagcagcaggcggcatcgctg
gaagagacctccgccagcatggagcagcttaccgctaccgtgcgccaaaacacctcaaac
gcccagcacgccagctcgctggccagcgacgcgtcgcaggttgcgctgcgcggcggcgat
gtggtcggccaggtggttaccaccatgtcggcgattgcggaaagctcgcagcatatcgtc
gatattatcggcacaatcgaaggcatcgctttccagaccaatatcctggcgctgaacgcg
gcggtggaagcggcgcgggcgggcgaacagggtcgcggtttcgcggtagtcgccagcgaa
gtgcgcgcgctggcgcagcgcagcgccacggcggcgaaagagattaaagggctgatccat
cagtcaaccgagcgcgtgacggagggcaccggtctggtggccgatgccggctccacgatg
aaagatatcgtgacctcgattcagcgcgtgtcggagatcatgaatgagatctccacggcc
tctgatgaacaggcaaacggcattgagcatgtgggcctggcggtcgcgcagatggatgaa
gtgacgcagcagaacgccgcactggttgaacaggccgccgccgccgccgcgtcgctggaa
gatcaggcttctcacctcacccgcagcgtggcgatttttaaaaccgcgcacgtctga
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