Mixta calida: C2E16_11530
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Entry
C2E16_11530 CDS
T05419
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pcd
Mixta calida
Pathway
pcd00061
Fatty acid biosynthesis
pcd00071
Fatty acid degradation
pcd01100
Metabolic pathways
pcd01212
Fatty acid metabolism
pcd02024
Quorum sensing
pcd04146
Peroxisome
Module
pcd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
C2E16_11530
00071 Fatty acid degradation
C2E16_11530
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
C2E16_11530
09145 Cellular community - prokaryotes
02024 Quorum sensing
C2E16_11530
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pcd01004
]
C2E16_11530
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcd04147
]
C2E16_11530
Enzymes [BR:
pcd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
C2E16_11530
Lipid biosynthesis proteins [BR:
pcd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
C2E16_11530
Exosome [BR:
pcd04147
]
Exosomal proteins
Exosomal proteins of breast milk
C2E16_11530
Exosomal proteins of breast cancer cells
C2E16_11530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
DUF4235
Motif
Other DBs
NCBI-ProteinID:
AUY25475
UniProt:
A0ABM6S2E8
LinkDB
All DBs
Position
complement(2443052..2444764)
Genome browser
AA seq
570 aa
AA seq
DB search
MANKYDFRGESLNKVWLNRYPADVPAEIDADRYTSLIDLFEQASQRYADRPAFTNMGQSM
SFRTLEQRSRAFAAYLQHKLGLSKGDRVAIMMPNLLQYPVALFGVLRAGLVVVNVNPLYT
PRELEHQLNDSGAKAIVIVSNFAHTLEKVVARTPVKHVILTRLGDQLSPAKATLVNFVVK
YIKRLVPKYNLPDAVSFRSVLQQGAQLGYIRPAIFNDDLAFLQYTGGTTGIAKGAMLTHR
NMQANLEQTKATYGSLLRDGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIP
GFVKELSRYPFTAITGVNTLFNALLNDKQFQQLDFSTLRLSAGGGMSVQKAVAERWEKLT
GHYLLEGYGLTECSPLVSVNPYDITCHNGSIGLPVPSTDIKLVDDNGLEVAEGQPGELCI
KGPQVMIGYWQRPDATEEVLKDGWLYSGDIVTVDEEGFLRIVDRKKDMILVSGFNVYPNE
IEDVVMQHPKVREAAAIGVPSDLSGEAVKICIVKKDPGLTKEELIAHCRRHLTGYKVPKI
VEFRDDLPKTNVGKILRRALRDEISKAPAA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataaatatgatttccgaggtgaatccttgaataaggtctggctgaaccgttac
cccgccgatgttccggccgagatcgatgccgatcgttatacgtcgcttatcgatctgttt
gaacaggcgtcccagcgttacgccgatcgtcccgcgtttaccaatatgggacagtcgatg
agtttccgtacgctggagcagcgtagccgggcttttgccgcgtatctccagcataagctg
ggactgagcaaaggcgatcgcgtcgccattatgatgccgaacctgctgcaatatccagtg
gcgctgttcggcgtgctgcgcgccgggttggtagtggtgaacgtcaatccgctctatacg
ccgcgcgagctggagcatcagctcaatgacagcggcgccaaagcgattgtcattgtctct
aacttcgcccacacgctggaaaaagtggtggcgaggacgccggttaaacacgttattctg
acgcgcctgggcgatcagctttcgcccgcgaaagccacgctggtcaacttcgtggtgaaa
tacatcaagcgcctggtgccgaaatataatctgccggatgcggtctctttccgcagcgta
ttgcagcagggcgcacagctgggctatatcagacccgctatcttcaacgacgatctcgcc
tttttgcagtacaccggcggcactaccggcatcgccaaaggggcaatgctgacgcaccgc
aatatgcaggccaatctcgaacagactaaagccacctatggttcgctgctgcgcgacggc
aaagagctggtggtgacggctttgccgctctatcacatcttcgcgctgaccgtgaactgc
ctgctgtttatcgaactgggcggccagaatctgctgatcaccaatccgcgcgatattccc
ggctttgtaaaagagctaagcagatatccttttaccgcgattaccggcgtcaacacgctg
tttaatgcgctgctgaatgacaaacagttccagcaactcgatttttctacgctgcgcctg
tctgccggtggcggcatgtcggtacagaaggcggtagcggagcgctgggaaaagctgacc
ggccactatctgctggaaggttacggcctgaccgagtgctcgccgctggtgtcggtcaat
ccttacgatattacctgtcataacggcagcatcggcctgccggtaccctcgaccgatatt
aagctggtggatgataacggccttgaagtggcagaagggcagccgggcgagctttgcatc
aaaggcccgcaggtgatgatcggttactggcagcggcctgatgccaccgaagaagtgctg
aaagatggctggctctacagcggcgatatcgtgaccgtcgatgaagagggctttttacgc
atcgtcgatcgtaaaaaggatatgattctggtctccggcttcaatgtctaccccaatgaa
atcgaggatgtggtgatgcagcatccgaaagtgcgcgaagcggcggcgatcggcgtgccc
agcgacctctccggtgaagcggttaaaatctgcatcgtgaaaaaagatcctgggctgacc
aaagaggagctgatcgctcactgccgtcgtcacctgaccggctacaaggtgccgaagatt
gtcgaattccgtgacgacctgccgaaaaccaacgttggcaaaattctgcgccgcgcgttg
cgcgacgagataagcaaagcgcctgccgcctga
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