Mixta calida: C2E16_12380
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Entry
C2E16_12380 CDS
T05419
Name
(GenBank) exodeoxyribonuclease X
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
pcd
Mixta calida
Pathway
pcd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C2E16_12380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcd03400
]
C2E16_12380
DNA repair and recombination proteins [BR:
pcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
C2E16_12380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
AUY25625
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All DBs
Position
2577415..2578086
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AA seq
223 aa
AA seq
DB search
MLRVIDTETCGLQGGIVEIASVDVIDGQIVNPMSDLVCPDRPISRQAMAVHRITEAMVAD
KPPIEALIHRYHGSPYYVAHNASFDRRMLPEMHGEWICTMKLARQLWPGLRYGNQALREH
LKLEVTTPADLHAHRALYDCYVTAALLIRIMETSGWDAPRMAGVVSAPTAAGQDVMPFGK
YRGRAIAEVAKRDPGYLRWMLNSIPDLKPALRTALQKQVNQED
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgctacgcgttattgatactgaaacctgcggtctgcagggcggtatcgttgagatcgct
tccgtcgacgtgattgacggacaaatcgtcaatcccatgagcgatctggtctgtcccgac
cgccctatcagccgtcaggcgatggcggtacaccgcattaccgaagcgatggtggccgat
aagccgccaattgaggcattgatccatcgctatcacggcagcccctactacgtcgcccat
aacgccagcttcgatcgtcgcatgctgccggaaatgcatggcgaatggatctgcaccatg
aaactggcgcgtcagctctggccgggtctgcgctacggaaaccaggcgctgcgcgagcat
ctgaagctggaggtgacaacgcccgccgatctacatgcgcaccgcgcgctgtatgactgc
tacgtcaccgccgcgctgctgatccgcattatggaaacctccggctgggacgcgccgcgc
atggcgggcgtcgtgagcgccccgaccgctgccgggcaggatgtaatgcccttcggcaaa
tatcgcggacgcgccatcgccgaggtagcgaaacgcgaccccggctacctgcgctggatg
ctgaattctatcccggatctgaaacctgccctgcgcactgcgctgcaaaagcaggttaat
caggaggattag
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