Mixta calida: C2E16_12515
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Entry
C2E16_12515 CDS
T05419
Name
(GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
pcd
Mixta calida
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcd03016
]
C2E16_12515
Transfer RNA biogenesis [BR:
pcd03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
C2E16_12515
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_23
Methyltransf_25
Methyltransf_12
Methyltransf_31
Methyltransf_11
CMAS
PCMT
NpmA
PrmA
Motif
Other DBs
NCBI-ProteinID:
AUY25652
LinkDB
All DBs
Position
2608589..2609557
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AA seq
322 aa
AA seq
DB search
MIDFGRFYQQIAQGPLASWLEVLPAQLAAWQRENLHGHFRHWQKSVDNLPLLTPQHIDLI
NSVTADSDTLSERQRQGIEKLLRNLMPWRKGPYSLYGTYIDTEWHSDWKWDRVLPHISPL
TERTVLDVGCGSGYHMWRMLGAGARLVVGIDPMQLFLCQFEAVRKLLGDDRRAHLLPLGI
EQLPELKAFDTVFSMGVLYHRRSPLDHLFQLKNQLVSGGELVLETLVIEGDEHDVLVPGE
RYAQMRNVWFIPSAAALQCWLEKCGFVDVRIVDFSRTSTEEQRRTDWMTTESLADFLDPH
DSGKTLEGYPAPLRAVLVARKP
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatttcggtagattttatcagcagatcgcccagggcccgctggcaagctggctg
gaagtgctgccagcgcagctggcggcatggcagcgcgaaaacctgcacggccattttcgc
cactggcagaagtcggtggacaacctgccgctgctgacgccgcagcatatcgatttaatc
aacagcgtcaccgccgacagcgatacgctcagcgagcgtcagcgtcagggcattgaaaag
ctgctgcgcaacctgatgccgtggcgcaaaggcccctactcgctttatggcacttatatc
gatactgagtggcactccgactggaaatgggatcgcgtgctgccgcatatctctccgctg
accgaacgcacagtgctggacgtcggctgcggcagcggctatcacatgtggcgcatgctc
ggcgccggcgccaggctggtcgtaggcatcgatcccatgcagctgttcctgtgccagttt
gaagcggtacgtaaactgctgggcgacgatcggcgcgcgcacctgctgccgctgggcatc
gagcagctgccggagctgaaagcgttcgacaccgtcttttccatgggcgtgctttatcac
cgccgttcgccgctcgatcatctctttcagctgaaaaaccagctggtgagcggcggcgaa
ctggtgctggaaacgctggtgattgagggcgacgagcatgatgtgctggtgccgggcgaa
cgctatgcgcaaatgcgcaacgtctggtttatcccttccgccgccgcgctacagtgctgg
ctggaaaagtgcggtttcgttgatgtgcgcatcgtcgatttttcccgcaccagcacagaa
gaacagcgccgtaccgactggatgaccaccgaatcgctggcggacttcctcgatccgcac
gacagcggcaaaacgctggagggctatcccgccccgctgcgcgccgtgctggtggcgcgc
aaaccgtaa
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