Mixta calida: C2E16_13220
Help
Entry
C2E16_13220 CDS
T05419
Name
(GenBank) HAMP domain-containing protein
KO
K05874
methyl-accepting chemotaxis protein I, serine sensor receptor
Organism
pcd
Mixta calida
Pathway
pcd02020
Two-component system
pcd02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C2E16_13220
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
C2E16_13220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pcd02035
]
C2E16_13220
Bacterial motility proteins [BR:
pcd02035
]
Flagellar system
Chemotaxis proteins
MCPs
C2E16_13220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
TarH
TPD52
HAMP
HAMP_2
Motif
Other DBs
NCBI-ProteinID:
AUY25777
UniProt:
A0ABN5HFK3
LinkDB
All DBs
Position
2758890..2760485
Genome browser
AA seq
531 aa
AA seq
DB search
MSLLSVLPLRLSRLARRPAFRLPAFLFSLSGGFWTFLALFCLLQCASVLMITLSVNHSHA
TVETARQLHTRQALLENARVALLTASDNSHRAGIWFMQDKETGSVDSWKPLAASAATALA
EAQSLFSRYGAPKESALSQSFNQLTEGLQEQLKSLNDNTIDGFFMVPMEAFQQQFSEAWR
ATLTEADRQAGVTNDATLHSLTESRNLLLFFSLLLLAMLATAGWLLLRGVLRPLNQAASE
LKHIAIGNLNQPLAQRGRQSHEMAQLWQAMTQMQQGLQHIVREINAIADAVMQSAEGMVR
QSDTLNHSNQQQSSAFAHISARLSRMAEEVENSSRFTHHATQQVQHTDSLTQRCGEMVSQ
VDTHMQDIVLASGEIAGIVNLLEGLSLQTRMLALNAAIESAHAGVYGRGFSVVAKEIGLL
SNQSSHSTREIDRRIQHTHQHIATGSERVQALEALYGEIRTEVSGVVVLLAELEQNAAAQ
SQRVGKIAAEIARMAQQVEENEALSQQSALASQTLIQQAQRLSQSVRQFSL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctactatcagtgcttcccctgcgtctgtcgcgcctggcgcgtcgtcccgctttt
cgcttgcccgcctttttattcagtctcagcggcggattctggacctttctggctctgttt
tgcctgttgcagtgcgccagcgtgctgatgattaccctgtcggtgaatcacagccacgcc
acggtggaaaccgcgcggcagctgcatacccgtcaggcgctgctggaaaacgcgcgcgtc
gcgctgctgaccgccagcgacaacagccatcgcgccggcatctggtttatgcaggataag
gagaccggatcggtcgacagctggaagccgctcgcagccagcgcggcgacggcgttggcc
gaggcgcagtcgctgttctcccgctacggcgcgccgaaggagagcgcgctgtcgcagagc
ttcaatcagctgacggaagggttgcaggagcagctgaaaagcctcaacgacaacacgatc
gacggcttttttatggtgccgatggaggcgtttcaacagcagttcagcgaggcatggcgc
gccacgctgaccgaggccgatcgtcaggctggcgtaaccaacgacgcgacgctgcattcg
ctgaccgaaagccgcaacctgctgctgttcttctcgctgctgttgctggcgatgctggcg
acggcgggatggctgctgctgcgcggcgtgctgcggccgctgaatcaggcggccagcgag
ctgaaacatatcgccatcggcaatttgaatcagccgctggcgcagcgcggccgccagtcg
catgagatggcgcagctgtggcaggcgatgacgcagatgcagcagggattgcagcatatc
gtgcgcgaaatcaacgctattgctgacgcggtgatgcagagcgcggaaggcatggtgcgg
cagagcgacacgcttaaccacagcaatcagcagcagagcagcgcctttgcccatatctcc
gcgcgcctgtcgcgcatggctgaagaggtagagaacagcagccgctttacccatcatgcc
actcaacaggtgcagcataccgacagcctgacgcagcgctgcggcgaaatggtgagtcag
gtcgatacgcatatgcaggatatcgtgctggcctccggcgaaatcgccggcatcgtcaat
ctgctggaagggttgtcgttgcaaacgcgaatgctggcgctgaatgcggcgatcgaatcg
gcgcatgccggcgtctacggacgcggtttttccgtggtggctaaagagattggcctgctg
tcgaaccagagcagccattccacgcgcgagatcgatcgccgcattcagcatacgcatcag
catatcgctaccgggtcggaacgcgtgcaggcgctggaggcgctctatggcgagatccgc
accgaggtgtcgggcgttgtggtgctgttagcggagctggagcagaacgcggcggcgcaa
agccagcgcgttggtaagatcgctgcggagattgcgcgcatggcgcaacaggtggaagag
aacgaagcgctgtcgcagcaaagcgccctcgcctcacaaacgttgatccaacaggcgcag
cgcctttcgcaaagcgtgcgccagttcagtctgtag
DBGET
integrated database retrieval system
