KEGG   Mixta calida: C2E16_13355
Entry
C2E16_13355       CDS       T05419                                 
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
  KO
K12678  autotransporter family porin
Organism
pcd  Mixta calida
Brite
KEGG Orthology (KO) [BR:pcd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pcd02000]
    C2E16_13355
   02044 Secretion system [BR:pcd02044]
    C2E16_13355
Transporters [BR:pcd02000]
 Other transporters
  Pores ion channels [TC:1]
   C2E16_13355
Secretion system [BR:pcd02044]
 Type V secretion system
  Autotransporter-1 (AT-1) family
   C2E16_13355
SSDB
Motif
Pfam: Autotransporter AC_1 Pertactin Trypan_PARP
Other DBs
NCBI-ProteinID: AUY25801
LinkDB
Position
2787202..2789970
AA seq 922 aa
MPIPCFPFRFSLLARFVSSTLGLTIALSAPAQANGLLCFNNSSCHQIEDWIASGYKFVTG
VNESSPDPEFPDNTVYSLNIVNEAENLGMVFESDATLILNAGDLLTLNDQGKAVNAPGTL
TVGTAATNGKLELASNVTIISSRENLAEKNNSPYSNSGVYLMTGSKLSIGGNLNLHNQFE
TQGINNENGNLRVQGGVSVQRQPGEQFQAPEKFTAIENTGNIDIGGMLTLLSKPASATDS
GAFYGIKNNGGKITVGGLLAVDVTNSAASQTYYGLKNSGDVSLTGMAAVLSRAQENDEGK
RDFYHIDNSGTLDINGQVFLDSQSLVNAERNDRFINDVYAIYSTGETTLNATSLLLNGKM
VADGGAITLANDPAYSGYITGLTETQNGGTINMTLAGANSIWAMTGDSSLTNLSLNNGAT
LNFGGNQSAVFRTLTVEGNYHGDDALLVMNTQLGGDASPTDRLVIQGDTSGRTFVQINNL
NGLGSETENGIELISVGGVSAGTFDQKGRTTAGLYDYFLRKKENNWYLTSQYETPEPEPT
PEPAPEPAPEPAPVPAPEPAPKPDPAPAPEPAPAPEPAPAPEPAPAPEPAPAPEPAPAPE
PAPAPEPALAPEPTPAPAKRAWRPESGSYMANIAAMNSLFLLQYHDRLAQQTRQSLANGE
THGALWLRQTGGRDRNIDLSGQLTTRGNSYVTQLGSDLLTFSHGESAFTVGAFAGYGHHR
NHTRASLTGYRSRGQVNGYSLGLYGSWLNNGAYIDSWLQHTWFNGSVKGDELENQVYKAK
GYLASIESGYAMRAGAVTLTPKAQLAWLGVKADTFTDSQGTRVKSKGDGSLLTRLGARVA
LTEGSLVTPYIEANWRHHTQPFAVQMGTGENQPSGARNLAEVKLGGEARLAQRLTGSVDV
THAAGAHRYQETSGRLNLSWTF
NT seq 2769 nt   +upstreamnt  +downstreamnt
atgccaatcccctgcttcccgtttcgattttctttattagcccgctttgtttcttcaacc
ctgggcctgactatagcgttatccgcgcctgcccaggcgaacggcctgctctgttttaat
aacagttcgtgccaccagatcgaagactggatcgcctccgggtataaatttgtaacgggc
gtgaacgagagttcgccagacccggaatttcccgacaatacggtttactcgctaaatatt
gttaacgaagcagagaacctgggcatggtttttgaaagcgatgcgacgcttatcctcaac
gcaggcgacctgttaacgcttaacgatcagggtaaagcggtgaatgctcccggcacgctg
acggtcggcactgcggcgacgaatggaaaactggagctggccagcaacgtgaccattatc
tcatcaagagaaaacctcgctgaaaaaaataacagcccttattcaaattctggcgtctat
ttaatgacgggaagcaagctgtccattggcggtaacctgaacctccataatcagtttgaa
acgcagggcattaataacgagaacggtaatctgcgcgttcagggtggcgtcagcgtacaa
cgacagccgggagaacagtttcaggcgccggaaaagtttactgcgattgaaaacacagga
aatatcgatattggcggcatgctcaccctgctctcaaagccagcgagcgcaaccgacagc
ggcgcgttctatggtatcaagaataacggcgggaaaatcaccgtcggcggccttttggct
gtggatgtaaccaatagcgccgccagtcaaacctattacggcttaaaaaacagcggcgac
gtcagcttaaccggcatggccgccgtgctgtcacgcgcgcaggaaaacgacgaaggcaag
cgcgatttttaccatattgataacagcggcacgctcgatattaacggtcaggtttttctc
gacagccaaagcctggtgaatgcggagcgtaacgatcgctttatcaatgacgtttacgcc
atttattcaacgggcgaaaccaccctcaacgccaccagcctgctgctgaatggcaaaatg
gttgccgacggcggtgccatcactctcgccaacgacccggcctacagcggttatattacc
ggtctgaccgaaacgcaaaacggcggcacgattaatatgacgctcgcaggcgcaaacagc
atctgggcgatgacgggcgacagctcgctgactaacctgagcctcaataacggcgcaacg
ctcaatttcggcggcaaccaaagcgccgtgttccgcacgctaacggtggaaggcaactac
catggcgacgatgcgctgctggtgatgaatacccagctgggcggcgatgcttcgcccact
gacaggctggttattcagggcgacacgtccggcagaacctttgtgcagatcaataacctt
aacggtctgggaagcgagacggaaaacgggatagagttgattagcgtcggcggcgtttca
gcaggcacgttcgatcagaaaggccgtactaccgccggactgtatgattacttcctgcgg
aagaaagagaacaattggtatttaaccagccagtatgagacgccggagccagagccaacc
cctgaacctgcgccggaaccggcacctgaacccgcgcctgtgcccgcgcctgaacctgcg
cccaaacctgacccggcgcccgcgcctgaacccgcgcccgcacctgaacctgcgcccgca
cctgaacccgcgcccgcgcctgaacccgctcccgcacctgaacccgctcccgcacctgaa
cctgcgcccgcacctgaacccgcgctcgcgccggaaccgacgcccgcgcccgccaaacgg
gcctggcgaccggaaagcggaagctatatggcaaacatcgccgcaatgaacagcctgttt
ttgctgcaatatcacgatcgcctcgcgcagcaaacgcgtcagagtctggcgaacggggaa
acccacggcgcgctgtggctgcgtcagaccggcggccgcgaccgcaacatcgatcttagc
ggccagctaacgacgcgcggcaacagctatgtgacgcagctcggcagcgatctgctgacg
ttcagccacggcgaaagcgccttcaccgtcggcgcctttgccggatatggccaccaccgc
aatcatacccgcgcgtcgctcaccggttaccgctcacgcggccaggtgaacggctacagc
ctcggcctttacggcagctggctgaacaacggcgcttatatcgacagctggcttcaacac
acctggtttaacggcagcgtgaaaggcgatgagctggagaatcaggtctataaagccaaa
ggctacctggcctctatagagagcggctacgcaatgcgcgccggcgccgtcaccctgacg
cctaaagcgcagctggcctggctgggcgtcaaggcggatacctttacagatagccaggga
acccgagtaaaaagcaaaggcgacggcagcctgttgacccgcctgggggcgcgcgtcgcg
ctgaccgaaggcagcctcgtcacgccctacatcgaggccaactggcggcatcacacacag
cctttcgccgtgcagatgggcaccggcgaaaaccagccgtcaggcgcgcgtaatctggcg
gaagtgaaactgggaggagaagcgcgtctggcgcagcggctgactggctctgtcgatgtg
acgcacgcggcgggcgcgcatcgttatcaggaaacctcaggaaggctgaatctgagctgg
acgttctga

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