Mixta calida: C2E16_13625
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Entry
C2E16_13625 CDS
T05419
Name
(GenBank) LPS O-antigen chain length determinant protein WzzB
KO
K05789
chain length determinant protein (polysaccharide antigen chain regulator)
Organism
pcd
Mixta calida
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pcd01005
]
C2E16_13625
Lipopolysaccharide biosynthesis proteins [BR:
pcd01005
]
O-antigen repeat unit
C2E16_13625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzz
GNVR
SpoIIIAH
Apolipoprotein
ABA4-like
DUF287
Motif
Other DBs
NCBI-ProteinID:
AUY25849
LinkDB
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Position
complement(2841790..2842809)
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AA seq
339 aa
AA seq
DB search
MNQESKTTTDQSLLRQTFYNNDDELDLLDVVAQLWSGKKTIILTVLVFLLLAAIYLFFAK
EKWTSEAIVTQPSAGQVANYNAALNVLYSQYPQDKPGLVDLQRQLFGRFSASLYALSGSL
QNLENPLNLNVAPVTAGQAEPLSVKFTAETAKEAQAQVTHFIKVVNDDVVDDYGADIKRN
MDVKLRELSDSLTSQLKVAQDKKEQRIEQLKQALKVAEGSGIVTSQLTQAEFLSDDTLYM
LGTKALNAAIANEATRPLPLDDSYYATQRALRLIKDLKIQVDNLQSFRYIMQPDLPIRRD
SPKKGLTLVLAVLLGGVVGSAIVLGRNMAATWRQRKQLS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaaagtaaaacaactacggatcagtctttacttcgtcaaaccttctataac
aacgatgatgagcttgacctgctggatgtggtagcgcagctgtggagcggtaaaaaaacg
attattttaaccgtccttgtatttttgctgctggcggcaatttatctttttttcgccaaa
gaaaagtggacgtcggaagcgattgtgacccagcccagcgcgggccaggtggccaactat
aatgctgcgttaaacgtgctttattctcaatatccccaggataaaccgggcttagtcgat
ctccagcgtcagctgttcggtcgctttagcgcttcgctctatgccttgtcaggttcgctg
cagaatctggaaaatcccctgaatttaaacgtggcgccggttacggcggggcaggctgag
cccttaagcgtaaaatttaccgctgagacggcgaaagaggcgcaggcgcaggtcacgcac
tttattaaagtggtgaacgacgacgtggttgatgactacggcgccgatatcaagcgcaat
atggatgtgaaactacgcgagctgagcgactcgctgacctcgcagctgaaggtggcgcag
gataagaaagagcagcgcattgagcagctgaagcaggcgttaaaagtggcggagggctca
ggcattgtgacctcccagctgactcaggcggagtttttatcagacgatacgctctatatg
ctgggcaccaaggcgttgaatgcggctatcgctaacgaagcgacgcgtccgttgccgctg
gatgacagctactatgccacccagcgcgcgctgcgcctgatcaaggatctgaagatccag
gtcgataacctgcaatccttccgctatatcatgcagccggatttgcctattcgtcgtgac
agcccgaaaaaaggactgacgctggtgctggcggtattgctgggcggcgttgtgggttcg
gcgattgtgctgggacgcaatatggctgcgacatggcggcaacgtaaacagcttagctga
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