Mixta calida: C2E16_15810
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Entry
C2E16_15810 CDS
T05419
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pcd
Mixta calida
Pathway
pcd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C2E16_15810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcd03400
]
C2E16_15810
DNA repair and recombination proteins [BR:
pcd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C2E16_15810
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C2E16_15810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AUY26225
UniProt:
A0ABM6S3L7
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All DBs
Position
complement(3332701..3333435)
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AA seq
244 aa
AA seq
DB search
MEGWQRAFVLHGRPWSETSLMLDLFTENHGRVRVISKGARSKRSHLKGALQPFTPLLVRW
GGRGEVKTLRNVEAVSLALPLSGIALYCGLYVNELLARVLQHETPFPELFFDYLHCLQSL
AEANGSPEPALRRFELALLGHMGYGVDFLHCAGTGEDIEDGMTYSYREEKGFIASLVINQ
RSFTGRQLRALYEREFPDGDTLRAAKRFTRMALKPWLGGKPLKSQELFRQFIPKKRADAQ
NNQE
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggaaggctggcagcgcgcttttgttctgcatggacggccctggagcgaaaccagcctg
atgctggatctctttacggaaaaccatgggcgggtgcgcgtcatctccaaaggcgcgcgt
tcgaagcgctcccatcttaagggggcgctccagcctttcacgccgctgctggtgcgctgg
ggcgggcgcggcgaagtcaaaaccctgcgcaacgtcgaagccgtttcgttggcgctgccg
ctgagcggcatcgcgctctactgcggtctttacgtcaacgagctgttggcgcgcgtgctg
cagcatgaaaccccgtttcctgaactcttcttcgattaccttcactgtctccagtctctt
gcggaagccaacggcagcccggaaccggccctgcgccgttttgagctggcgctgctgggc
catatgggttacggcgtcgacttcctgcactgcgccggcaccggcgaggatattgaagac
ggcatgacctacagctatcgtgaagagaaaggctttatcgccagcctggtgatcaatcag
cgcagctttaccggacgacagctgcgggcgctgtatgagcgcgagtttcccgacggcgat
acgctgcgcgccgccaaacgctttacccgcatggcgctgaagccgtggctgggcggcaaa
ccgttaaaaagtcaggagctgttccgtcagttcatccctaaaaaacgcgcggatgcacaa
aacaatcaggaataa
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