KEGG   Mixta calida: C2E16_16560
Entry
C2E16_16560       CDS       T05419                                 
Name
(GenBank) PIN domain-containing protein
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
pcd  Mixta calida
Brite
KEGG Orthology (KO) [BR:pcd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pcd03016]
    C2E16_16560
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pcd02048]
    C2E16_16560
Transfer RNA biogenesis [BR:pcd03016]
 Prokaryotic type
  tRNA degradation factors
   C2E16_16560
Prokaryotic defense system [BR:pcd02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    C2E16_16560
SSDB
Motif
Pfam: PIN PIN_3
Other DBs
NCBI-ProteinID: AUY26351
LinkDB
Position
3465964..3466380
AA seq 138 aa
MIKTYMLDTNICSFIMREQPEAVIKRLEQAVLRNHRIVVSAITYAEMRFGAIGKKASPRH
GLLVEAFCARLDAILSWDRAAVDATTEIKAALTAAGTPIGPNDTAIAGHAIAAGAVLVTN
NVREFEHVPGLVLEDWAN
NT seq 417 nt   +upstreamnt  +downstreamnt
gtgatcaagacctatatgctggacaccaacatttgctccttcatcatgcgtgagcagccg
gaagctgtcattaaacggctggaacaggcagtactgcgcaatcatcgtatcgtggtttcg
gccatcacctatgccgagatgcgtttcggtgcgatcggaaagaaggcatctccccgccat
ggcttgctcgtcgaagctttctgcgcccgtctcgatgcaatcctctcctgggatcgcgcc
gcggtggacgcaaccacagagattaaggccgcgctgactgcggccgggacgccaatcggt
ccgaacgacacggcgattgccgggcatgccatcgccgccggcgccgtactggtgacgaac
aacgtgcgagagtttgagcatgtgcctgggctggttctggaagactgggctaactga

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