Mixta calida: C2E16_16890
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Entry
C2E16_16890 CDS
T05419
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pcd
Mixta calida
Pathway
pcd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C2E16_16890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcd03400
]
C2E16_16890
Enzymes [BR:
pcd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C2E16_16890
DNA repair and recombination proteins [BR:
pcd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2E16_16890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AUY26408
LinkDB
All DBs
Position
complement(3538701..3542090)
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AA seq
1129 aa
AA seq
DB search
MFTVYHSNQLDILKSLAAYLIENEPLRDPFQSEVVLVQSPGMAQWLQMQLAQQFGIAANI
AFPLPATFIWDMFVRVLPGIPKESAFNKSSMSWKLMTLLPNLLREEAFRPLQHYLNDDDD
KRKLFQLASRVADLYDQYLVYRPEWLNSWQQGQTIDGLGEAQQWQAPLWARLVEYTRELG
QPEWHRANLYARFIQKLENSAERPAGLPDRVFICGISALPPVYLQALQALGKHIDIHLLF
TNPCRHYWGDIQDYAFLAKLQSRRRRHHQQQQEIALFRDPDEASSLFNDEGEQQLTNPLL
ASWGKLGRDNLYLLAQMEAREIDAFVEVPDDTLLRAMQHDLLELEDNAVIGLNAEELNSS
HKKRLLDPQDRSVVVHVCHSPQREVEVLQDQLLAMMEADPSLTPRDIIVMVADIDAYTPY
IQAVFGNAPTDRYLPFAISDRRASFAHPAIMAFINLLGLPESRFACEEVLALLEVPALAA
RFAIDEEGLRRLRMWVEESGIRWGLDDDNVRELELPPTGQHTWRFGITRMLLGYAMESEH
GHWDGILPYDESSGLIAELAGNLAELLMQLNHWRQVLARPRALTDWQPLCREMLQAFFAA
DVNTDAALMLIEEQWQQVMTWGLQARYDDAVPAALLRDELAARLDQQRISQRFLAGPVNF
CTLMPMRSVPFRVVCLLGMNDGVYPRTLPPLGFDLMAQQPQKGDRSRRDDDRFLFLEALL
SAQQRLYISYIGRSIQDNTERYPSVLVTELVDYIAQRFHLPGDEALDVDSSARRVLDHLH
CLHSRMPFDPQNFAPQSEYRSFAHEWLPAARGSGEPHPPFMQPLPPLPLNELSFEQLLRF
WRHPVRAFFTLRLGVSFALEQTELPDAEPFVLDALDRYQINAQLLNALIEEEDTQRLFHH
HRAAGVLPYGAFGELFWQTQQEEMAPLAEQVRELRDESRSVEIDLTIADVRLNGWLPQVQ
ESGLLRWRPGVLNFTDGLALWLEHLAWCAMGGQGQSRMLGRKESRWCFDAIDAEQARSWL
TRYVEGYRDGMCSPLLLLPKTGGAWLEASYDAKNDIMLMDEATQAKARAKLLTAWQGNYQ
LEGEGSDPYLQRLFRTLEATHLDAICSAAEQWLLPLLRFNRGDTQKNDE
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgtttacggtttatcactccaaccagctcgatatcctcaaatcgctggcggcgtatctg
attgaaaacgaaccgttacgcgatcctttccagtctgaagtggtgctggtgcaaagccct
ggcatggcgcagtggctgcaaatgcagctggcgcagcagttcggcatcgccgccaatatc
gcctttccgctgcccgccacctttatttgggatatgttcgtgcgcgtgctgcccggcatt
cccaaagaaagcgcctttaataaatccagcatgagttggaagctgatgacgctgctgccg
aacctgctgcgcgaagaggcgtttcgcccgttgcagcactatctcaacgacgacgacgat
aagcgcaagctgtttcagctcgcctcgcgcgtcgccgatctttatgaccagtatctggtc
taccgccctgaatggctcaacagctggcagcagggccaaaccatcgacggactgggcgaa
gcgcagcagtggcaggcgccgctctgggccaggctggtggaatatacgcgcgagctgggg
cagccggagtggcatcgcgccaatctctacgcccgctttattcaaaagctggaaaacagc
gccgagcgtccggcggggctgcccgatcgcgtctttatctgcggcatttcggcgctgccg
ccggtctacctgcaggcgctgcaggcgctgggcaagcatatcgacattcatctgctgttc
actaatccctgtcgccactactggggcgacattcaggactacgcttttctggcgaagctg
caaagtcgccgccgtcgccaccatcagcagcagcaggagatcgcgctgttccgcgacccg
gatgaggcttcttccctgtttaacgacgagggcgaacagcagctgaccaatccgctgctc
gcctcctggggcaagctgggacgcgacaatctctatctgctggcgcagatggaggcgcgc
gaaatcgacgcgtttgtcgaggtgccggacgacacgctgctgcgggcgatgcagcacgat
ctgctggagctggaggataacgcggtaatcggcctgaacgccgaagagctgaacagcagc
cataagaaacgcctgctcgatccgcaggatcgttccgtggtggtgcatgtctgccacagt
cctcagcgtgaagtggaggtgttgcaggatcagctgctggcgatgatggaggcggacccg
tcgctgacgccgcgcgatattatcgtgatggtggccgatatcgacgcctacacaccctat
attcaggcggtatttggcaatgcgcctacggatcgttatctgccgttcgccatttcagat
cgccgcgccagcttcgcccatccggcgatcatggcctttatcaacttactgggcctgccg
gaaagccgcttcgcctgcgaagaggtgctggcgctgctggaggtgccggcgctggcggca
cgcttcgccattgatgaagaagggttgcgccgcctgcggatgtgggtcgaggagtcgggc
atccgctgggggctggatgacgataatgtgcgcgagctggagctgccgccgaccggccag
cacacctggcgcttcggtattactcgcatgctgcttggctatgcgatggagagcgaacat
ggccactgggacggcatcctgccttacgatgaatccagcggtctgatcgccgagctggcg
ggcaacctggcggagctgctgatgcagcttaaccactggcgtcaggtactggcgcgaccg
cgcgcgctgaccgactggcagccgctgtgtcgggagatgttacaggcgtttttcgccgcc
gacgtaaataccgacgccgcgctgatgctgattgaagagcagtggcagcaggtgatgacc
tggggtttgcaggcgcgttacgacgacgcggtgccggcggcgttgttgcgcgatgagctg
gccgcccgcctggatcagcagcgcatcagccagcgttttctggcggggccggtcaacttc
tgcaccctgatgccgatgcgctcggtgccgttccgcgtggtctgcctgctgggtatgaac
gacggcgtttacccgcgtacgctgccgccgctgggcttcgatctgatggcgcagcagccg
caaaaaggggaccgcagccgccgcgacgatgaccgttttctgtttcttgaggcgttgctg
tcggcgcagcagcgtctttatatcagctatattggccgctcgattcaggacaatacggaa
cgatatccctcggtgctggtcactgaactggtggattacatcgcgcaacgttttcatctg
cccggcgacgaagcgttggacgtcgacagcagcgcccggcgcgtgttggatcatctgcac
tgtctgcacagccggatgccttttgatccgcagaacttcgcgccgcagtcggaatatcgc
agcttcgcccatgagtggctgcctgcggcgcgcggcagcggcgagccgcatccgccgttt
atgcagccgttgccgccgttgccgctcaacgaactgagctttgaacagctgctgcgcttc
tggcgtcatccggtgcgcgcgttttttacgctgcgcctcggcgtcagtttcgcgctggag
cagacggagctgccggacgccgaacctttcgtgctggacgcgcttgaccgttatcagatc
aacgcgcagctactgaacgcactgattgaggaagaagacacccagcggctgttccatcat
catcgcgcggcgggcgtactgccctacggcgccttcggcgagctgttctggcaaacgcag
caggaagagatggcgccgctggcggagcaggttcgggagctgcgcgacgagagccgcagc
gtagagatcgacctgacgatcgcggacgtcaggctcaacggctggctgccgcaggtgcag
gaaagcgggctgctgcgctggcggccaggcgtgctgaacttcaccgatggcctggcgctc
tggctggagcatctcgcctggtgcgccatgggcggtcaggggcagagccgcatgctggga
cgcaaagagagccgctggtgcttcgacgcgatcgacgcggagcaggcgcgaagctggcta
acccgttatgttgaaggctatcgtgacggcatgtgctcgccgctgctgctgctgccgaaa
accggcggcgcctggctggaggcgagctacgacgccaaaaacgatatcatgctgatggat
gaggcgacccaggcgaaagcgcgcgcgaagctgctcaccgcctggcaagggaactatcag
ctggagggagaagggagcgatccctatctgcagcggctgttccgcacgctggaggcgacg
catcttgacgctatctgctccgccgccgagcagtggctgctgccgctgctgcgctttaac
cgcggcgatacgcagaaaaacgacgaatag
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