Mixta calida: C2E16_17885
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Entry
C2E16_17885 CDS
T05419
Name
(GenBank) G/U mismatch-specific DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
pcd
Mixta calida
Pathway
pcd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C2E16_17885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcd03400
]
C2E16_17885
Enzymes [BR:
pcd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
C2E16_17885
DNA repair and recombination proteins [BR:
pcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C2E16_17885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF5081
Motif
Other DBs
NCBI-ProteinID:
AUY26589
LinkDB
All DBs
Position
complement(3755556..3756074)
Genome browser
AA seq
172 aa
AA seq
DB search
MSDHEIKDIIAPGLRVVFCGINPGKSSAHTGHHFAYSGNRFWKTLWLAGFTERQLKPEEE
LHLLDTRCGITRLVDRPTKEASELSTDELREGGKSLIEKMLHYQPAALAVLGKDAYKKAF
RQSKVEWGRQAATIGETEVWVLPNPSGLNRATQEKLTEAYKELESALTLRGR
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcatgagatcaaagatattatcgcgcccggcctgcgggtggttttttgcggc
atcaatccgggcaagtcttccgcccataccggtcaccacttcgcttattcaggaaaccgc
ttctggaaaacgctctggctggccggctttaccgagcgccagctcaaaccggaagaggag
ttgcacctgctggatacccgctgcggtatcaccaggctggtggatcgaccaacaaaagag
gccagcgagctgtcgacggatgagctgcgcgaaggcggcaagtcattgatagaaaaaatg
ctgcattaccagccagcggcgctggcggtgttaggtaaggatgcctacaaaaaggcgttt
cgtcagagcaaagtggagtggggcaggcaggctgccaccatcggcgaaacggaagtctgg
gtgttgcccaatcccagcggcctgaaccgcgccacgcaggaaaagctgacggaagcctat
aaagaactggaaagcgcgctgacgctgcgcggacgttag
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