Mixta calida: C2E16_18565
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Entry
C2E16_18565 CDS
T05419
Name
(GenBank) miniconductance mechanosensitive channel MscM
KO
K22051
miniconductance mechanosensitive channel
Organism
pcd
Mixta calida
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcd02000
]
C2E16_18565
Transporters [BR:
pcd02000
]
Other transporters
Pores ion channels [TC:
1
]
C2E16_18565
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
AUY26700
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All DBs
Position
3883022..3886348
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AA seq
1108 aa
AA seq
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MRLILSFILACVFTLPAFAASAPDAAQVRQELEQAKSAKASPAQAELVQTLESALGFINA
RNESLERAKQYQQVIDDFPKLARELRQQIASLNDSQRTLRSGMTSAELDQEILQVSSQLL
EEGRQAQQEQDRAREISDSLGQLPQQQSEARRALSESERTLHGQAVASGALTHAQNYARQ
AESAALKARVDELELAQLSANNRQELARMRAEVHQKKAEQLDDYLQALRNQLNSLRQREA
EQALARTEQLAENSGDLPAAIAEQFHVNRELSAALNQQAQRLDLIASQQRQATNQTIQVR
QALSTIREQSQWLGASNLLGEALRAQVARLPEMPKSQQLDSEMGQLRVQRLHYEDLLNQQ
QHLRQLKQENGAPLTSEQNRILDAQIKTQRELLGSLISGCDTLILEVTKLKVANSQLEDA
LGEIKEATHRYLFWTADVNPLSLSYPLEVARDLNRLLSLDTLGQLGGALMMMVTSRDTVL
PILGALLLVGFSVSSRRHYNAFLARAAGRVGKVTQDHFTLTLRTVFWSILVALPLPVLWG
ALGFGLQHAWPYPVAVAIGDGVTATLPLLWVFMISAAFARPNGLFVIHFRWPQLRVARAM
RYYSLSIGFIVPLIMLLITFANLEDRQFSATLGRLCFILICGALSLVTVSLKRAGIPLYL
DNEGSGDNVINRILWNVMICIPLAAALASCTGYLATAQALLARLETSVAIWFLLLVIYHI
IRRWMLIQRRRIAFDRARQRRADMLAHRARGEEESAAQTADGVDVEEPVIDLDAISAQSL
RLVRSILTLIALLSVIVLWSEIHSAFAFLENIKLWNASSTVQGVESLHPITLGSVLIAIL
IFFITTQLVRNMPALLELALLQHLSLTPGTGYAITTLTKYLLLLIGGLMGFSMIGIEWSK
LQWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSITRINTRATTI
TDWDRKEIIVPNKAFITEQFVNWSLSDSVTRVVLTVPAPAGIDSEQVTALLRHACERCSY
VLDTPPPEVFLVDLQQGIQLFELRIHAAEMGHRMPLRHELHQLILQGFREHNIEMPFPPF
QVRMETAAKRTPASNGAPTTRTFKSGGL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgatcctctcttttattctcgcctgcgtattcaccctgcccgccttcgccgcc
agcgcgcctgacgcggcgcaggttcgtcaggagctggagcaggcgaaatccgccaaagcg
tcgccggctcaggctgagctggtgcaaacgctggaatccgcgctgggctttatcaacgcc
cgcaacgagtcgctggagcgggcgaaacagtatcagcaggtgatcgatgattttcctaag
ctggcgcgcgagctgcgccagcagatcgccagcctcaacgacagccagcggacattgcgc
agcggcatgaccagcgccgagctggatcaggagatcctgcaggtcagcagtcagctgctg
gaagagggacgccaggcgcagcaggagcaggatcgcgcccgcgagatcagcgattcgctg
ggtcaactgccacagcagcagagcgaggcgcgtcgcgcgctgagcgaaagcgaacgcacg
ttacatgggcaagccgtcgcctccggcgcgctgacccatgcgcagaactacgcgcgtcag
gcggagtcggcggcgctgaaggcgcgcgttgacgagctggaactggcgcagctttctgcc
aacaaccgtcaggaactggcgcggatgcgcgccgaagtgcatcagaaaaaagcggagcag
ctggatgactatctgcaggcgctgcgcaaccagcttaacagcctgcgtcagcgcgaagcg
gagcaggcgctggcgcgcaccgagcagctggcggaaaacagcggcgatctgcccgcggcg
atcgccgaacagtttcacgtcaaccgggagctgtccgccgcgctgaaccaacaggcgcag
cgtctcgatcttatcgcctcgcagcagcgtcaggccaccaatcaaaccattcaggttcgt
caggcgctcagcaccattcgtgaacagtcgcagtggctcggcgcctccaatttgctgggc
gaggcgctgcgtgcgcaggtggcgcgcctgccggaaatgcctaagtcgcagcagctggac
agcgaaatgggccagctgcgcgtgcagcgtctgcactatgaagatctgcttaatcagcag
cagcacctgcgtcagctgaagcaggaaaacggcgcgccgctgaccagcgaacagaaccgc
attctcgacgcacagataaaaacccagcgggagctgctcggttcgctgatttccggctgc
gataccctgattctggaggtcactaagctgaaagtggccaacagccagctggaagacgcg
ctgggcgaaatcaaagaggccacgcaccgctaccttttctggaccgccgacgtcaatccg
ctgagcctgagctatccgctggaggtggcgcgcgatctgaaccggctgctgtcgctcgat
acgctgggccagctcggcggcgcgctgatgatgatggtcaccagccgcgacacggtgctg
ccgattctgggcgcacttctgctggtcggcttcagcgttagttcgcgccgtcactacaat
gcgtttctggcgcgcgccgccggacgcgtcggtaaggtgacgcaggaccatttcactctg
acgttgcgcaccgttttctggtcgattctggtcgccctgcccttgccggtgttgtggggg
gcgctcggctttgggttgcagcacgcctggccttacccggtcgcggtggcgatcggcgac
ggcgtgaccgccacgctgccgctgctctgggtgtttatgatcagcgccgccttcgcccga
cccaacgggctgtttgtgattcacttccgctggccgcagctgcgagtggcgcgcgccatg
cgctactactcgctctccatcggctttatcgtgccgctgattatgctactcatcaccttc
gccaacctggaggatcgacagttttccgctaccctgggacggctctgctttattctgatc
tgcggcgcgctgagcctggtgaccgtcagcctgaagcgcgccggcatcccgctttatctc
gataatgaaggcagcggcgacaacgtgatcaaccgcatcctgtggaatgtgatgatctgt
attcctctggcggcggcgctcgcctcctgcaccggctacctggcgaccgcgcaggcgctg
ctggcgcgtctggagacctcggtcgccatctggttcctgctgctggtgatttatcacatt
attcgccgctggatgctgatccagcgccgccgcatcgccttcgatcgcgcacgtcagcgt
cgcgccgatatgctggcgcatcgcgcgcgcggcgaagaagaatcggccgcgcagacggcg
gacggcgtggatgtcgaggagccggtgatcgatcttgacgccatcagcgcgcagtcgctg
cgcctggtgcgctcgattctgacgctgatcgccctgctctcggtgattgtgctgtggtcg
gaaattcattccgccttcgcctttctggagaatatcaagctgtggaatgccagcagtacg
gtgcagggcgtggaaagcctgcatccgattacccttggctcggtgctgatcgctatcctg
atcttctttatcaccacccagctggtgcgcaatatgcccgccctgctggagctggcgctg
ttgcagcatctcagcctgacgcccggcaccggctacgccattacgaccctgaccaaatat
ctgctgctgctgattggcggcctgatgggtttctcgatgatcggcatcgaatggtcgaaa
ctgcaatggctggtggcggcgctcggcgtggggctgggatttggtctccaggagattttc
gccaactttatctctggcctgatcattctgtttgagaagccgatccgtatcggcgatacg
gtcaccattcgcgatctgaccggcagcattacgcgcatcaatacgcgcgccaccaccatc
accgactgggatcgcaaagaaatcatcgtgccgaacaaggcgtttatcaccgagcagttc
gtgaactggtcgctctccgactccgtgacgcgcgtggtgctgaccgtgcctgcgccggct
ggcatcgacagcgagcaggtgaccgcgctgctgcgccacgcctgcgaacgctgtagctat
gtgctggatactccgccgccggaagtgttcctggtcgatttgcagcagggcattcagctg
ttcgagctgcgcattcacgctgcggagatgggtcatcgtatgccgctgcgtcacgagctg
caccagctcattctgcaaggcttccgcgaacataatattgaaatgccgttcccgccgttc
caggtgcgtatggagaccgcggcgaaacggacgcccgccagcaacggcgcgccgaccacg
cgcacctttaagtcaggcggactttag
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